RNA–Protein interactions for RNA: ENST00000409497.5

SCRN1-202, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCRN1, Length 1,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-202ENST00000409497 PLSCR1O15162 318 aa8.53□□□□□ -1.04
SCRN1-202ENST00000409497 KCNQ3O43525 872 aa8.53□□□□□ -1.04
SCRN1-202ENST00000409497 HSP90AB1P08238 724 aaKnown RBP8.53□□□□□ -1.04
SCRN1-202ENST00000409497 SLC52A2Q9HAB3 445 aa8.53□□□□□ -1.04
SCRN1-202ENST00000409497 SPON1Q9HCB6 807 aa8.53□□□□□ -1.04
SCRN1-202ENST00000409497 NOB1Q9ULX3 412 aaKnown RBP8.53□□□□□ -1.04
SCRN1-202ENST00000409497 TNNQ9UQP3 1299 aa8.53□□□□□ -1.04
SCRN1-202ENST00000409497 PKD1L3Q7Z443 1732 aa8.52□□□□□ -1.05
SCRN1-202ENST00000409497 EXOC5O00471 708 aa8.52□□□□□ -1.05
SCRN1-202ENST00000409497 MRPL50Q8N5N7 158 aaKnown RBP8.52□□□□□ -1.05
SCRN1-202ENST00000409497 PANK1Q8TE04 598 aa8.52□□□□□ -1.05
SCRN1-202ENST00000409497 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.05
SCRN1-202ENST00000409497 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
SCRN1-202ENST00000409497 PARP4Q9UKK3 1724 aaKnown RBP8.52□□□□□ -1.05
SCRN1-202ENST00000409497 RLBP1P12271 317 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 TRIM27P14373 513 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 BRPF1P55201 1214 aaPredicted RBP8.51□□□□□ -1.05
SCRN1-202ENST00000409497 EIF4A1P60842 406 aaKnown RBP8.51□□□□□ -1.05
SCRN1-202ENST00000409497 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 ZKSCAN2Q63HK3 967 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 NFATC2IPQ8NCF5 419 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 KCNQ2O43526 872 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
SCRN1-202ENST00000409497 B4GALNT3Q6L9W6 998 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 ATF7IPQ6VMQ6 1270 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 IPO4Q8TEX9 1081 aaKnown RBP8.51□□□□□ -1.05
SCRN1-202ENST00000409497 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
SCRN1-202ENST00000409497 COG6Q9Y2V7 657 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 ADAMTS7Q9UKP4 1686 aa8.51□□□□□ -1.05
SCRN1-202ENST00000409497 CABP4P57796 275 aa8.5□□□□□ -1.05
SCRN1-202ENST00000409497 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
SCRN1-202ENST00000409497 ZNF790Q6PG37 636 aa8.5□□□□□ -1.05
SCRN1-202ENST00000409497 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
SCRN1-202ENST00000409497 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
SCRN1-202ENST00000409497 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
SCRN1-202ENST00000409497 MRC1P22897 1456 aa8.5□□□□□ -1.05
SCRN1-202ENST00000409497 IPO8O15397 1037 aaKnown RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 SRCAPQ6ZRS2 3230 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 RRP9O43818 475 aaKnown RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 SLC4A2P04920 1241 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 CCDC30Q5VVM6 783 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 PAXIP1Q6ZW49 1069 aaPredicted RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 TEX2Q8IWB9 1127 aa8.49□□□□□ -1.05
SCRN1-202ENST00000409497 MARCH10Q8NA82 808 aaPredicted RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
SCRN1-202ENST00000409497 TNS2Q63HR2 1409 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 RREB1Q92766 1687 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 PRAMEF22A3QJZ6 481 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
SCRN1-202ENST00000409497 HOXB7P09629 217 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 MS4A1P11836 297 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 EIF2S2P20042 333 aaKnown RBP8.48□□□□□ -1.05
SCRN1-202ENST00000409497 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 TMEM57Q8N5G2 664 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 ARHGAP45Q92619 1136 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 STK31Q9BXU1 1019 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 STK32BQ9NY57 414 aa8.48□□□□□ -1.05
SCRN1-202ENST00000409497 KDM3BQ7LBC6 1761 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 NUP188Q5SRE5 1749 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 SHANK3Q9BYB0 1731 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 BCL9O00512 1426 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 MVPQ14764 893 aaKnown RBP8.47□□□□□ -1.05
SCRN1-202ENST00000409497 G2E3Q7L622 706 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-202ENST00000409497 NAP1L2Q9ULW6 460 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-202ENST00000409497 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
SCRN1-202ENST00000409497 YY1P25490 414 aa8.46□□□□□ -1.05
SCRN1-202ENST00000409497 PLCB2Q00722 1185 aa8.46□□□□□ -1.05
SCRN1-202ENST00000409497 SIPA1L3O60292 1781 aaPredicted RBP8.46□□□□□ -1.05
SCRN1-202ENST00000409497 ABCC4O15439 1325 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 PTPRCP08575 1304 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 FLIIQ13045 1269 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 TXNRD1Q16881 649 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 FMNL2Q96PY5 1086 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 API5Q9BZZ5 524 aaKnown RBP8.46□□□□□ -1.06
SCRN1-202ENST00000409497 TMOD3Q9NYL9 352 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
SCRN1-202ENST00000409497 SBF2Q86WG5 1849 aa8.45□□□□□ -1.06
SCRN1-202ENST00000409497 RGPD3A6NKT7 1758 aaPredicted RBP8.45□□□□□ -1.06
SCRN1-202ENST00000409497 RGPD4Q7Z3J3 1758 aa8.45□□□□□ -1.06
SCRN1-202ENST00000409497 ANXA1P04083 346 aa8.45□□□□□ -1.06
SCRN1-202ENST00000409497 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
SCRN1-202ENST00000409497 PIGBQ92521 554 aa8.45□□□□□ -1.06
SCRN1-202ENST00000409497 PHAXQ9H814 394 aaKnown RBP8.45□□□□□ -1.06
SCRN1-202ENST00000409497 DDX19BQ9UMR2 479 aa8.45□□□□□ -1.06
SCRN1-202ENST00000409497 VIRMAQ69YN4 1812 aaKnown RBP8.44□□□□□ -1.06
SCRN1-202ENST00000409497 F6X3S4 739 aa8.44□□□□□ -1.06
SCRN1-202ENST00000409497 CLSTN1O94985 981 aa8.44□□□□□ -1.06
SCRN1-202ENST00000409497 SNRPA1P09661 255 aaKnown RBP8.44□□□□□ -1.06
SCRN1-202ENST00000409497 SLC15A2Q16348 729 aa8.44□□□□□ -1.06
SCRN1-202ENST00000409497 PTF1AQ7RTS3 328 aa8.44□□□□□ -1.06
SCRN1-202ENST00000409497 PROM2Q8N271 834 aa8.44□□□□□ -1.06
SCRN1-202ENST00000409497 SYTL4Q96C24 671 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms