RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 USP16Q9Y5T5 823 aa19.56■□□□□ 0.72
AP1S3-204ENST00000409375 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
AP1S3-204ENST00000409375 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
AP1S3-204ENST00000409375 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
AP1S3-204ENST00000409375 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
AP1S3-204ENST00000409375 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
AP1S3-204ENST00000409375 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
AP1S3-204ENST00000409375 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
AP1S3-204ENST00000409375 HYPKQ9NX55 129 aa19.54■□□□□ 0.72
AP1S3-204ENST00000409375 CYP19A1P11511 503 aaPredicted RBP19.53■□□□□ 0.72
AP1S3-204ENST00000409375 BRPF1P55201 1214 aaPredicted RBP19.53■□□□□ 0.72
AP1S3-204ENST00000409375 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
AP1S3-204ENST00000409375 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
AP1S3-204ENST00000409375 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
AP1S3-204ENST00000409375 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
AP1S3-204ENST00000409375 ITPK1Q13572 414 aa19.52■□□□□ 0.72
AP1S3-204ENST00000409375 TXNRD1Q16881 649 aa19.52■□□□□ 0.72
AP1S3-204ENST00000409375 CHPF2Q9P2E5 772 aa19.52■□□□□ 0.72
AP1S3-204ENST00000409375 TAF1LQ8IZX4 1826 aa19.51■□□□□ 0.71
AP1S3-204ENST00000409375 BCL2L13Q9BXK5 485 aa19.51■□□□□ 0.71
AP1S3-204ENST00000409375 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
AP1S3-204ENST00000409375 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
AP1S3-204ENST00000409375 TCERG1O14776 1098 aaKnown RBP19.5■□□□□ 0.71
AP1S3-204ENST00000409375 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
AP1S3-204ENST00000409375 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
AP1S3-204ENST00000409375 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
AP1S3-204ENST00000409375 MS4A1P11836 297 aa19.49■□□□□ 0.71
AP1S3-204ENST00000409375 PTPRCP08575 1304 aa19.49■□□□□ 0.71
AP1S3-204ENST00000409375 BCAR3O75815 825 aa19.48■□□□□ 0.71
AP1S3-204ENST00000409375 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
AP1S3-204ENST00000409375 A1BGP04217 495 aa19.48■□□□□ 0.71
AP1S3-204ENST00000409375 MYL6BP14649 208 aa19.48■□□□□ 0.71
AP1S3-204ENST00000409375 IL6STP40189 918 aaPredicted RBP19.48■□□□□ 0.71
AP1S3-204ENST00000409375 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
AP1S3-204ENST00000409375 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
AP1S3-204ENST00000409375 RREB1Q92766 1687 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 FLIIQ13045 1269 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 ARHGAP45Q92619 1136 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 AK7Q96M32 723 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
AP1S3-204ENST00000409375 EN1Q05925 392 aaPredicted RBP19.46■□□□□ 0.71
AP1S3-204ENST00000409375 PDIA6Q15084 440 aa19.46■□□□□ 0.71
AP1S3-204ENST00000409375 CAMKK2Q96RR4 588 aa19.46■□□□□ 0.71
AP1S3-204ENST00000409375 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
AP1S3-204ENST00000409375 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
AP1S3-204ENST00000409375 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
AP1S3-204ENST00000409375 A0A087WZG4 1122 aa19.45■□□□□ 0.7
AP1S3-204ENST00000409375 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 KCNQ4P56696 695 aa19.45■□□□□ 0.7
AP1S3-204ENST00000409375 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 INTS5Q6P9B9 1019 aaKnown RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 NOB1Q9ULX3 412 aaKnown RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 ZNF330Q9Y3S2 320 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
AP1S3-204ENST00000409375 NBPF26B4DH59 902 aa19.44■□□□□ 0.7
AP1S3-204ENST00000409375 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
AP1S3-204ENST00000409375 NBPF10Q6P3W6 841 aaKnown RBP19.44■□□□□ 0.7
AP1S3-204ENST00000409375 PROM2Q8N271 834 aa19.44■□□□□ 0.7
AP1S3-204ENST00000409375 NBPF15Q8N660 670 aa19.44■□□□□ 0.7
AP1S3-204ENST00000409375 RTCBQ9Y3I0 505 aaKnown RBP19.44■□□□□ 0.7
AP1S3-204ENST00000409375 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
AP1S3-204ENST00000409375 GNPATO15228 680 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 RPS6KA4O75676 772 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 ANXA1P04083 346 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 EZH2Q15910 746 aaKnown RBP19.43■□□□□ 0.7
AP1S3-204ENST00000409375 PROSER3Q2NL68 480 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 ATF7IPQ6VMQ6 1270 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
AP1S3-204ENST00000409375 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
AP1S3-204ENST00000409375 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
AP1S3-204ENST00000409375 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
AP1S3-204ENST00000409375 COPS6Q7L5N1 327 aa19.42■□□□□ 0.7
AP1S3-204ENST00000409375 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
AP1S3-204ENST00000409375 XAGE3Q8WTP9 111 aa19.42■□□□□ 0.7
AP1S3-204ENST00000409375 UPF1Q92900 1129 aaKnown RBP eCLIP19.42■□□□□ 0.7
AP1S3-204ENST00000409375 EP400Q96L91 3159 aa19.41■□□□□ 0.7
AP1S3-204ENST00000409375 ADRA2BP18089 450 aa19.41■□□□□ 0.7
AP1S3-204ENST00000409375 EIF5P55010 431 aaKnown RBP19.41■□□□□ 0.7
AP1S3-204ENST00000409375 COL15A1P39059 1388 aa19.41■□□□□ 0.7
AP1S3-204ENST00000409375 N4BP2Q86UW6 1770 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-204ENST00000409375 NEFLP07196 543 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 G2E3Q7L622 706 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 ARXQ96QS3 562 aa19.4■□□□□ 0.7
AP1S3-204ENST00000409375 SSFA2P28290 1259 aa19.39■□□□□ 0.69
AP1S3-204ENST00000409375 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
AP1S3-204ENST00000409375 KSR2Q6VAB6 950 aa19.39■□□□□ 0.69
AP1S3-204ENST00000409375 DZIP3Q86Y13 1208 aaKnown RBP19.39■□□□□ 0.69
AP1S3-204ENST00000409375 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
AP1S3-204ENST00000409375 PLBD2Q8NHP8 589 aa19.39■□□□□ 0.69
AP1S3-204ENST00000409375 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
AP1S3-204ENST00000409375 TRIM27P14373 513 aa19.38■□□□□ 0.69
AP1S3-204ENST00000409375 NEXNQ0ZGT2 675 aa19.38■□□□□ 0.69
AP1S3-204ENST00000409375 TFCP2L1Q9NZI6 479 aa19.38■□□□□ 0.69
AP1S3-204ENST00000409375 UBR3Q6ZT12 1888 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms