RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 HDGFL1Q5TGJ6 251 aa26.35■■□□□ 1.81
VSX1-203ENST00000409285 CCNL1Q9UK58 526 aaPredicted RBP26.35■■□□□ 1.81
VSX1-203ENST00000409285 EN1Q05925 392 aaPredicted RBP26.34■■□□□ 1.81
VSX1-203ENST00000409285 ITPK1Q13572 414 aa26.34■■□□□ 1.81
VSX1-203ENST00000409285 DNAJC10Q8IXB1 793 aa26.34■■□□□ 1.81
VSX1-203ENST00000409285 USP16Q9Y5T5 823 aa26.34■■□□□ 1.81
VSX1-203ENST00000409285 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
VSX1-203ENST00000409285 STARD3NLO95772 234 aa26.33■■□□□ 1.81
VSX1-203ENST00000409285 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
VSX1-203ENST00000409285 CCDC30Q5VVM6 783 aa26.33■■□□□ 1.81
VSX1-203ENST00000409285 TUBGCP6Q96RT7 1819 aa26.32■■□□□ 1.8
VSX1-203ENST00000409285 CYP19A1P11511 503 aaPredicted RBP26.32■■□□□ 1.8
VSX1-203ENST00000409285 RARSP54136 660 aaKnown RBP26.31■■□□□ 1.8
VSX1-203ENST00000409285 TXNRD1Q16881 649 aa26.31■■□□□ 1.8
VSX1-203ENST00000409285 BRPF1P55201 1214 aaPredicted RBP26.3■■□□□ 1.8
VSX1-203ENST00000409285 PROM2Q8N271 834 aa26.3■■□□□ 1.8
VSX1-203ENST00000409285 RCAN3Q9UKA8 241 aa26.3■■□□□ 1.8
VSX1-203ENST00000409285 N4BP2Q86UW6 1770 aaPredicted RBP26.3■■□□□ 1.8
VSX1-203ENST00000409285 CNTNAP4Q9C0A0 1308 aa26.3■■□□□ 1.8
VSX1-203ENST00000409285 CAMKK2Q96RR4 588 aa26.3■■□□□ 1.8
VSX1-203ENST00000409285 LRRC4BQ9NT99 713 aa26.3■■□□□ 1.8
VSX1-203ENST00000409285 EIF2S2P20042 333 aaKnown RBP26.29■■□□□ 1.8
VSX1-203ENST00000409285 SSH1Q8WYL5 1049 aa26.29■■□□□ 1.8
VSX1-203ENST00000409285 DBF4Q9UBU7 674 aaPredicted RBP26.29■■□□□ 1.8
VSX1-203ENST00000409285 C4AP0C0L4 1744 aa26.28■■□□□ 1.8
VSX1-203ENST00000409285 EZH2Q15910 746 aaKnown RBP26.28■■□□□ 1.8
VSX1-203ENST00000409285 LINC00116Q8NCU8 138 aa26.28■■□□□ 1.8
VSX1-203ENST00000409285 STK31Q9BXU1 1019 aa26.28■■□□□ 1.8
VSX1-203ENST00000409285 RC3H1Q5TC82 1133 aaKnown RBP26.27■■□□□ 1.8
VSX1-203ENST00000409285 DDX21Q9NR30 783 aaKnown RBP eCLIP26.27■■□□□ 1.8
VSX1-203ENST00000409285 BCORQ6W2J9 1755 aa26.26■■□□□ 1.8
VSX1-203ENST00000409285 PDIA6Q15084 440 aa26.26■■□□□ 1.79
VSX1-203ENST00000409285 CHPF2Q9P2E5 772 aa26.26■■□□□ 1.79
VSX1-203ENST00000409285 ARFGEF2Q9Y6D5 1785 aa26.26■■□□□ 1.79
VSX1-203ENST00000409285 CRKLP46109 303 aaKnown RBP26.25■■□□□ 1.79
VSX1-203ENST00000409285 CCDC87Q9NVE4 849 aa26.25■■□□□ 1.79
VSX1-203ENST00000409285 LRP10Q7Z4F1 713 aa26.24■■□□□ 1.79
VSX1-203ENST00000409285 SMC4Q9NTJ3 1288 aa26.24■■□□□ 1.79
VSX1-203ENST00000409285 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 KCNQ4P56696 695 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 NBPF14Q5TI25 921 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
VSX1-203ENST00000409285 INTS5Q6P9B9 1019 aaKnown RBP26.23■■□□□ 1.79
VSX1-203ENST00000409285 MRPL50Q8N5N7 158 aaKnown RBP26.23■■□□□ 1.79
VSX1-203ENST00000409285 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 NECTIN2Q92692 538 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 HYPKQ9NX55 129 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 KIF16BQ96L93 1317 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 SCN7AQ01118 1682 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 A1BGP04217 495 aa26.23■■□□□ 1.79
VSX1-203ENST00000409285 NUP98P52948 1817 aa26.22■■□□□ 1.79
VSX1-203ENST00000409285 ANKRD36CQ5JPF3 1778 aa26.22■■□□□ 1.79
VSX1-203ENST00000409285 IL6STP40189 918 aaPredicted RBP26.22■■□□□ 1.79
VSX1-203ENST00000409285 ZBTB1Q9Y2K1 713 aa26.22■■□□□ 1.79
VSX1-203ENST00000409285 SLC4A2P04920 1241 aa26.21■■□□□ 1.79
VSX1-203ENST00000409285 PROSER3Q2NL68 480 aa26.21■■□□□ 1.79
VSX1-203ENST00000409285 BCAR3O75815 825 aa26.2■■□□□ 1.78
VSX1-203ENST00000409285 BCL2L13Q9BXK5 485 aa26.2■■□□□ 1.78
VSX1-203ENST00000409285 PTPRCP08575 1304 aa26.18■■□□□ 1.78
VSX1-203ENST00000409285 TCERG1O14776 1098 aaKnown RBP26.18■■□□□ 1.78
VSX1-203ENST00000409285 EIF5P55010 431 aaKnown RBP26.18■■□□□ 1.78
VSX1-203ENST00000409285 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
VSX1-203ENST00000409285 ARHGAP45Q92619 1136 aa26.17■■□□□ 1.78
VSX1-203ENST00000409285 COL15A1P39059 1388 aa26.16■■□□□ 1.78
VSX1-203ENST00000409285 RPS6KA4O75676 772 aa26.16■■□□□ 1.78
VSX1-203ENST00000409285 ANXA1P04083 346 aa26.16■■□□□ 1.78
VSX1-203ENST00000409285 MYL6BP14649 208 aa26.16■■□□□ 1.78
VSX1-203ENST00000409285 FLIIQ13045 1269 aa26.16■■□□□ 1.78
VSX1-203ENST00000409285 AFDNP55196 1824 aaKnown RBP26.15■■□□□ 1.78
VSX1-203ENST00000409285 CANXP27824 592 aaKnown RBP26.15■■□□□ 1.78
VSX1-203ENST00000409285 PIP4K2AP48426 406 aaPredicted RBP26.15■■□□□ 1.78
VSX1-203ENST00000409285 AKT1S1Q96B36 256 aa26.15■■□□□ 1.78
VSX1-203ENST00000409285 AK7Q96M32 723 aa26.15■■□□□ 1.78
VSX1-203ENST00000409285 PXDNLA1KZ92 1463 aa26.14■■□□□ 1.78
VSX1-203ENST00000409285 G2E3Q7L622 706 aa26.14■■□□□ 1.78
VSX1-203ENST00000409285 PHAXQ9H814 394 aaKnown RBP26.14■■□□□ 1.78
VSX1-203ENST00000409285 GNPATO15228 680 aa26.13■■□□□ 1.77
VSX1-203ENST00000409285 ADRA2BP18089 450 aa26.13■■□□□ 1.77
VSX1-203ENST00000409285 IPO8O15397 1037 aaKnown RBP26.12■■□□□ 1.77
VSX1-203ENST00000409285 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
VSX1-203ENST00000409285 SSFA2P28290 1259 aa26.11■■□□□ 1.77
VSX1-203ENST00000409285 COPS6Q7L5N1 327 aa26.11■■□□□ 1.77
VSX1-203ENST00000409285 XAGE3Q8WTP9 111 aa26.11■■□□□ 1.77
VSX1-203ENST00000409285 NOB1Q9ULX3 412 aaKnown RBP26.11■■□□□ 1.77
VSX1-203ENST00000409285 ZNF827Q17R98 1081 aa26.11■■□□□ 1.77
VSX1-203ENST00000409285 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.11■■□□□ 1.77
VSX1-203ENST00000409285 A0A087WZG4 1122 aa26.1■■□□□ 1.77
VSX1-203ENST00000409285 RGL2O15211 777 aa26.1■■□□□ 1.77
VSX1-203ENST00000409285 DDX58O95786 925 aaKnown RBP26.1■■□□□ 1.77
VSX1-203ENST00000409285 RRP1P56182 461 aaKnown RBP26.1■■□□□ 1.77
VSX1-203ENST00000409285 ZKSCAN2Q63HK3 967 aa26.1■■□□□ 1.77
VSX1-203ENST00000409285 ADCY9O60503 1353 aa26.09■■□□□ 1.77
VSX1-203ENST00000409285 FKBP5Q13451 457 aaPredicted RBP26.09■■□□□ 1.77
VSX1-203ENST00000409285 ATF7IPQ6VMQ6 1270 aa26.09■■□□□ 1.77
VSX1-203ENST00000409285 NPM2Q86SE8 214 aaKnown RBP26.09■■□□□ 1.77
VSX1-203ENST00000409285 AMIGO3Q86WK7 504 aa26.08■■□□□ 1.77
VSX1-203ENST00000409285 API5Q9BZZ5 524 aaKnown RBP26.08■■□□□ 1.77
VSX1-203ENST00000409285 TRIM27P14373 513 aa26.07■■□□□ 1.76
VSX1-203ENST00000409285 PLBD2Q8NHP8 589 aa26.07■■□□□ 1.76
VSX1-203ENST00000409285 FRAT1Q92837 279 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms