RNA–Protein interactions for RNA: ENST00000407929.6

SLC8A1-208, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5

Gene SLC8A1, Length 3,434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-208ENST00000407929 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.71
SLC8A1-208ENST00000407929 SCN11AQ9UI33 1791 aa10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 ITPK1Q13572 414 aa10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 PHF14O94880 888 aa10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
SLC8A1-208ENST00000407929 KCNQ3O43525 872 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 CCDC27Q2M243 656 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 MRC1P22897 1456 aa10.63□□□□□ -0.71
SLC8A1-208ENST00000407929 HEG1Q9ULI3 1381 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 CRKLP46109 303 aaKnown RBP10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 ZNF827Q17R98 1081 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 WWC1Q8IX03 1113 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 CCDC87Q9NVE4 849 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 RFC4P35249 363 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 RGPD3A6NKT7 1758 aaPredicted RBP10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 RGPD4Q7Z3J3 1758 aa10.62□□□□□ -0.71
SLC8A1-208ENST00000407929 RPS6KA4O75676 772 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 SSFA2P28290 1259 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 RTL5Q5HYW3 569 aaPredicted RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 CHL1O00533 1208 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 CNTNAP4Q9C0A0 1308 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 EIF2S2P20042 333 aaKnown RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 SPON1Q9HCB6 807 aa10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 BCCIPQ9P287 314 aaKnown RBP eCLIP10.61□□□□□ -0.71
SLC8A1-208ENST00000407929 CYP19A1P11511 503 aaPredicted RBP10.6□□□□□ -0.71
SLC8A1-208ENST00000407929 ADRA2BP18089 450 aa10.6□□□□□ -0.71
SLC8A1-208ENST00000407929 NBR1Q14596 966 aa10.6□□□□□ -0.71
SLC8A1-208ENST00000407929 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
SLC8A1-208ENST00000407929 ZPR1O75312 459 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 HSP90B1P14625 803 aaKnown RBP10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 POLD1P28340 1107 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 MYH16Q9H6N6 1097 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 USP16Q9Y5T5 823 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 A0A087WZG4 1122 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 GIGYF1O75420 1035 aaPredicted RBP10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 IL16Q14005 1332 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 DLG5Q8TDM6 1919 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 COL23A1Q86Y22 540 aaPredicted RBP10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
SLC8A1-208ENST00000407929 ADAMTS7Q9UKP4 1686 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 A1BGP04217 495 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 MTFR1LQ9H019 292 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 LY75O60449 1722 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 PNPLA7Q6ZV29 1317 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 RREB1Q92766 1687 aa10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
SLC8A1-208ENST00000407929 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
SLC8A1-208ENST00000407929 NUP188Q5SRE5 1749 aa10.57□□□□□ -0.72
SLC8A1-208ENST00000407929 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
SLC8A1-208ENST00000407929 INTS5Q6P9B9 1019 aaKnown RBP10.57□□□□□ -0.72
SLC8A1-208ENST00000407929 PRAMEF22A3QJZ6 481 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 NLGN1Q8N2Q7 840 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 IPO4Q8TEX9 1081 aaKnown RBP10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 SMIM5Q71RC9 77 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 HOXB7P09629 217 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 KCPQ6ZWJ8 1503 aa10.56□□□□□ -0.72
SLC8A1-208ENST00000407929 MYL6BP14649 208 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 MSL1Q68DK7 614 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 E9PSI1 815 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 PIP4K2AP48426 406 aaPredicted RBP10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 STK31Q9BXU1 1019 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 SOS1Q07889 1333 aaPredicted RBP10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
SLC8A1-208ENST00000407929 C5P01031 1676 aa10.54□□□□□ -0.72
SLC8A1-208ENST00000407929 NPHP1O15259 732 aa10.54□□□□□ -0.72
SLC8A1-208ENST00000407929 EIF5P55010 431 aaKnown RBP10.54□□□□□ -0.72
SLC8A1-208ENST00000407929 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
SLC8A1-208ENST00000407929 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
SLC8A1-208ENST00000407929 KIF6Q6ZMV9 814 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms