RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
FAM49A-202ENST00000406434 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
FAM49A-202ENST00000406434 KCNQ3O43525 872 aa13.69□□□□□ -0.22
FAM49A-202ENST00000406434 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
FAM49A-202ENST00000406434 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 CYP19A1P11511 503 aaPredicted RBP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
FAM49A-202ENST00000406434 INTS5Q6P9B9 1019 aaKnown RBP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 ZNF496Q96IT1 587 aaPredicted RBP13.68□□□□□ -0.22
FAM49A-202ENST00000406434 CCDC87Q9NVE4 849 aa13.68□□□□□ -0.22
FAM49A-202ENST00000406434 MRC1P22897 1456 aa13.67□□□□□ -0.22
FAM49A-202ENST00000406434 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
FAM49A-202ENST00000406434 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
FAM49A-202ENST00000406434 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 STARD3NLO95772 234 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
FAM49A-202ENST00000406434 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
FAM49A-202ENST00000406434 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
FAM49A-202ENST00000406434 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 FMNL2Q96PY5 1086 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 MIS18AQ9NYP9 233 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
FAM49A-202ENST00000406434 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
FAM49A-202ENST00000406434 RIPK4P57078 832 aa13.65□□□□□ -0.22
FAM49A-202ENST00000406434 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
FAM49A-202ENST00000406434 NLGN1Q8N2Q7 840 aa13.65□□□□□ -0.22
FAM49A-202ENST00000406434 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
FAM49A-202ENST00000406434 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
FAM49A-202ENST00000406434 SRP68Q9UHB9 627 aaKnown RBP13.65□□□□□ -0.22
FAM49A-202ENST00000406434 ZPR1O75312 459 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 MMP10P09238 476 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 GPR162Q16538 588 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
FAM49A-202ENST00000406434 TJP1Q07157 1748 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 HEG1Q9ULI3 1381 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
FAM49A-202ENST00000406434 COL24A1Q17RW2 1714 aa13.63□□□□□ -0.23
FAM49A-202ENST00000406434 GYS1P13807 737 aa13.63□□□□□ -0.23
FAM49A-202ENST00000406434 ZNF330Q9Y3S2 320 aaPredicted RBP13.63□□□□□ -0.23
FAM49A-202ENST00000406434 DLG5Q8TDM6 1919 aa13.63□□□□□ -0.23
FAM49A-202ENST00000406434 TMPOP42166 694 aaKnown RBP13.62□□□□□ -0.23
FAM49A-202ENST00000406434 USPL1Q5W0Q7 1092 aa13.62□□□□□ -0.23
FAM49A-202ENST00000406434 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
FAM49A-202ENST00000406434 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
FAM49A-202ENST00000406434 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
FAM49A-202ENST00000406434 PRAMEF22A3QJZ6 481 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 ANP32CO43423 234 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 A1BGP04217 495 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
FAM49A-202ENST00000406434 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
FAM49A-202ENST00000406434 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
FAM49A-202ENST00000406434 SNRPA1P09661 255 aaKnown RBP13.6□□□□□ -0.23
FAM49A-202ENST00000406434 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
FAM49A-202ENST00000406434 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
FAM49A-202ENST00000406434 UBR2Q8IWV8 1755 aa13.59□□□□□ -0.23
FAM49A-202ENST00000406434 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
FAM49A-202ENST00000406434 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
FAM49A-202ENST00000406434 A0A087WZG4 1122 aa13.58□□□□□ -0.23
FAM49A-202ENST00000406434 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.23
FAM49A-202ENST00000406434 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.23
FAM49A-202ENST00000406434 CCDC184Q52MB2 194 aa13.58□□□□□ -0.23
FAM49A-202ENST00000406434 NARFQ9UHQ1 456 aa13.58□□□□□ -0.23
FAM49A-202ENST00000406434 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.23
FAM49A-202ENST00000406434 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.23
FAM49A-202ENST00000406434 COL15A1P39059 1388 aa13.58□□□□□ -0.24
FAM49A-202ENST00000406434 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
FAM49A-202ENST00000406434 CICQ96RK0 1608 aaPredicted RBP13.57□□□□□ -0.24
FAM49A-202ENST00000406434 YY1P25490 414 aa13.57□□□□□ -0.24
FAM49A-202ENST00000406434 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
FAM49A-202ENST00000406434 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
FAM49A-202ENST00000406434 TM4SF1P30408 202 aa13.56□□□□□ -0.24
FAM49A-202ENST00000406434 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
FAM49A-202ENST00000406434 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
FAM49A-202ENST00000406434 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 APAF1O14727 1248 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 DDR1Q08345 913 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 NFIXQ14938 502 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
FAM49A-202ENST00000406434 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
FAM49A-202ENST00000406434 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
FAM49A-202ENST00000406434 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
FAM49A-202ENST00000406434 MRS2Q9HD23 443 aa13.54□□□□□ -0.24
FAM49A-202ENST00000406434 POLRMTO00411 1230 aaKnown RBP13.53□□□□□ -0.24
FAM49A-202ENST00000406434 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
FAM49A-202ENST00000406434 TGFB2P61812 414 aa13.53□□□□□ -0.24
FAM49A-202ENST00000406434 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
FAM49A-202ENST00000406434 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
FAM49A-202ENST00000406434 SERPINB2P05120 415 aa13.52□□□□□ -0.25
FAM49A-202ENST00000406434 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
FAM49A-202ENST00000406434 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms