RNA–Protein interactions for RNA: ENST00000405598.5

CHEK2-209, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CHEK2, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-209ENST00000405598 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
CHEK2-209ENST00000405598 PPP4R2Q9NY27 417 aa13.21□□□□□ -0.29
CHEK2-209ENST00000405598 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
CHEK2-209ENST00000405598 BCL9O00512 1426 aa13.2□□□□□ -0.3
CHEK2-209ENST00000405598 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
CHEK2-209ENST00000405598 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
CHEK2-209ENST00000405598 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
CHEK2-209ENST00000405598 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
CHEK2-209ENST00000405598 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
CHEK2-209ENST00000405598 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
CHEK2-209ENST00000405598 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
CHEK2-209ENST00000405598 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 SEPT12Q8IYM1 358 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 FLIIQ13045 1269 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
CHEK2-209ENST00000405598 PDIA6Q15084 440 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 ABCC4O15439 1325 aa13.18□□□□□ -0.3
CHEK2-209ENST00000405598 MYL6BP14649 208 aa13.17□□□□□ -0.3
CHEK2-209ENST00000405598 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
CHEK2-209ENST00000405598 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
CHEK2-209ENST00000405598 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
CHEK2-209ENST00000405598 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
CHEK2-209ENST00000405598 TJP1Q07157 1748 aa13.16□□□□□ -0.3
CHEK2-209ENST00000405598 HOXB7P09629 217 aa13.16□□□□□ -0.3
CHEK2-209ENST00000405598 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
CHEK2-209ENST00000405598 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
CHEK2-209ENST00000405598 A1BGP04217 495 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 ARHGAP45Q92619 1136 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 SRCAPQ6ZRS2 3230 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 BTAF1O14981 1849 aa13.15□□□□□ -0.3
CHEK2-209ENST00000405598 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 KCNQ4P56696 695 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 UPF1Q92900 1129 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
CHEK2-209ENST00000405598 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
CHEK2-209ENST00000405598 ADCY9O60503 1353 aa13.13□□□□□ -0.31
CHEK2-209ENST00000405598 PTPRCP08575 1304 aa13.13□□□□□ -0.31
CHEK2-209ENST00000405598 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
CHEK2-209ENST00000405598 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
CHEK2-209ENST00000405598 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
CHEK2-209ENST00000405598 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
CHEK2-209ENST00000405598 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
CHEK2-209ENST00000405598 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHEK2-209ENST00000405598 IGHDP01880 384 aa13.11□□□□□ -0.31
CHEK2-209ENST00000405598 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
CHEK2-209ENST00000405598 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-209ENST00000405598 MEIS3Q99687 375 aa13.11□□□□□ -0.31
CHEK2-209ENST00000405598 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 ARFGEF2Q9Y6D5 1785 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 ITPK1Q13572 414 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
CHEK2-209ENST00000405598 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 DDX19BQ9UMR2 479 aa13.1□□□□□ -0.31
CHEK2-209ENST00000405598 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
CHEK2-209ENST00000405598 MS4A1P11836 297 aa13.09□□□□□ -0.31
CHEK2-209ENST00000405598 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
CHEK2-209ENST00000405598 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
CHEK2-209ENST00000405598 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
CHEK2-209ENST00000405598 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
CHEK2-209ENST00000405598 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
CHEK2-209ENST00000405598 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
CHEK2-209ENST00000405598 NUP188Q5SRE5 1749 aa13.08□□□□□ -0.32
CHEK2-209ENST00000405598 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
CHEK2-209ENST00000405598 COL5A3P25940 1745 aaPredicted RBP13.07□□□□□ -0.32
CHEK2-209ENST00000405598 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 SIK1P57059 783 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
CHEK2-209ENST00000405598 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 DNAAF4Q8WXU2 420 aa13.07□□□□□ -0.32
CHEK2-209ENST00000405598 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
CHEK2-209ENST00000405598 BEND3Q5T5X7 828 aa13.06□□□□□ -0.32
CHEK2-209ENST00000405598 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
CHEK2-209ENST00000405598 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
CHEK2-209ENST00000405598 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 LY75O60449 1722 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 TRIM37O94972 964 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
CHEK2-209ENST00000405598 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
CHEK2-209ENST00000405598 ATP10DQ9P241 1426 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms