RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 KIAA0556O60303 1618 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 PES1O00541 588 aaKnown RBP8.68□□□□□ -1.02
HDAC9-202ENST00000405010 CTAGE5O15320 804 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
HDAC9-202ENST00000405010 APPP05067 770 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 STX1AQ16623 288 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 PHACTR3Q96KR7 559 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 SYCP2Q9BX26 1530 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 GTF3C6Q969F1 213 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 KIF2CQ99661 725 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 PPIP5K1Q6PFW1 1433 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 ATP2B3Q16720 1220 aa8.68□□□□□ -1.02
HDAC9-202ENST00000405010 HOOK1Q9UJC3 728 aaKnown RBP8.68□□□□□ -1.02
HDAC9-202ENST00000405010 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ERLIN1O75477 346 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 CFAP100Q494V2 611 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 KIAA1524Q8TCG1 905 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ERCC4Q92889 916 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ERO1AQ96HE7 468 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 CCDC69A6NI79 296 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 EIF4G3O43432 1585 aaKnown RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 LMAN1P49257 510 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 AACSQ86V21 672 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 PTPRTO14522 1441 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 LRMPQ12912 555 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 ELF2Q15723 593 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 NOC3LQ8WTT2 800 aaKnown RBP8.67□□□□□ -1.02
HDAC9-202ENST00000405010 DUOX2Q9NRD8 1548 aa8.67□□□□□ -1.02
HDAC9-202ENST00000405010 NEXNQ0ZGT2 675 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 CEP170Q5SW79 1584 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 TRIM29Q14134 588 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 NME9Q86XW9 330 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 DNAI1Q9UI46 699 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 H0YHG0 523 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 DTNBO60941 627 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 ZSCAN20P17040 1043 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-202ENST00000405010 ZFP91Q96JP5 570 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-202ENST00000405010 TCEANC2Q96MN5 208 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 PRDM4Q9UKN5 801 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 SYNMO15061 1565 aa8.66□□□□□ -1.02
HDAC9-202ENST00000405010 ZSCAN12O43309 604 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 CPA1P15085 419 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 DDIT3P35638 169 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 FLIIQ13045 1269 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 KRT32Q14532 448 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 FSIP1Q8NA03 581 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 PALD1Q9ULE6 856 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 DISP1Q96F81 1524 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 IPO7O95373 1038 aaKnown RBP8.65□□□□□ -1.02
HDAC9-202ENST00000405010 ZNF75DP51815 510 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 CBX8Q9HC52 389 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 FAM173BQ6P4H8 233 aa8.65□□□□□ -1.02
HDAC9-202ENST00000405010 DDX58O95786 925 aaKnown RBP8.65□□□□□ -1.03
HDAC9-202ENST00000405010 SYT10Q6XYQ8 523 aa8.65□□□□□ -1.03
HDAC9-202ENST00000405010 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.03
HDAC9-202ENST00000405010 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.03
HDAC9-202ENST00000405010 CCDC150Q8NCX0 1101 aa8.65□□□□□ -1.03
HDAC9-202ENST00000405010 POLKQ9UBT6 870 aa8.65□□□□□ -1.03
HDAC9-202ENST00000405010 ZNF215Q9UL58 517 aaPredicted RBP8.65□□□□□ -1.03
HDAC9-202ENST00000405010 ABCC4O15439 1325 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 BIN1O00499 593 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 IRX3P78415 501 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-202ENST00000405010 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-202ENST00000405010 SIRT2Q8IXJ6 389 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 SIL1Q9H173 461 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 ARFGAP3Q9NP61 516 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 PPP1R42Q7Z4L9 355 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 C10orf67Q8IYJ2 551 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 MSH6P52701 1360 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 RTEL1-TNFRSF6BF6WH68 1400 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 GUCY1B3Q02153 619 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 ANKRD20A12PQ8NF67 263 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 PHF23Q9BUL5 403 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-202ENST00000405010 TOMM22Q9NS69 142 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 ZDHHC9Q9Y397 364 aa8.64□□□□□ -1.03
HDAC9-202ENST00000405010 NLRP1Q9C000 1473 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 TOP1P11387 765 aaKnown RBP8.63□□□□□ -1.03
HDAC9-202ENST00000405010 CASQ1P31415 396 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 ATP8B2P98198 1209 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 AIMP1Q12904 312 aaKnown RBP8.63□□□□□ -1.03
HDAC9-202ENST00000405010 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
HDAC9-202ENST00000405010 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms