RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 USP42Q9H9J4 1324 aaKnown RBP21.74■■□□□ 1.07
CGREF1-205ENST00000404694 NLGN1Q8N2Q7 840 aa21.74■■□□□ 1.07
CGREF1-205ENST00000404694 COL15A1P39059 1388 aa21.74■■□□□ 1.07
CGREF1-205ENST00000404694 STARD3NLO95772 234 aa21.74■■□□□ 1.07
CGREF1-205ENST00000404694 MMP10P09238 476 aa21.74■■□□□ 1.07
CGREF1-205ENST00000404694 SRP68Q9UHB9 627 aaKnown RBP21.74■■□□□ 1.07
CGREF1-205ENST00000404694 KDM3BQ7LBC6 1761 aa21.73■■□□□ 1.07
CGREF1-205ENST00000404694 WDR43Q15061 677 aaKnown RBP eCLIP21.73■■□□□ 1.07
CGREF1-205ENST00000404694 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
CGREF1-205ENST00000404694 MRS2Q9HD23 443 aa21.73■■□□□ 1.07
CGREF1-205ENST00000404694 CD2APQ9Y5K6 639 aa21.73■■□□□ 1.07
CGREF1-205ENST00000404694 TAF7Q15545 349 aaPredicted RBP21.72■■□□□ 1.07
CGREF1-205ENST00000404694 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
CGREF1-205ENST00000404694 THUMPD2Q9BTF0 503 aaKnown RBP21.71■■□□□ 1.07
CGREF1-205ENST00000404694 CANXP27824 592 aaKnown RBP21.7■■□□□ 1.06
CGREF1-205ENST00000404694 CCDC146Q8IYE0 955 aa21.7■■□□□ 1.06
CGREF1-205ENST00000404694 FKBP8Q14318 412 aa21.69■■□□□ 1.06
CGREF1-205ENST00000404694 LAMB4A4D0S4 1761 aa21.68■■□□□ 1.06
CGREF1-205ENST00000404694 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
CGREF1-205ENST00000404694 RIPK4P57078 832 aa21.68■■□□□ 1.06
CGREF1-205ENST00000404694 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
CGREF1-205ENST00000404694 ADAMTS8Q9UP79 889 aa21.68■■□□□ 1.06
CGREF1-205ENST00000404694 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 ZPR1O75312 459 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 EIF5P55010 431 aaKnown RBP21.67■■□□□ 1.06
CGREF1-205ENST00000404694 USPL1Q5W0Q7 1092 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 NARFQ9UHQ1 456 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 SCN7AQ01118 1682 aa21.67■■□□□ 1.06
CGREF1-205ENST00000404694 KIAA1551Q9HCM1 1747 aa21.66■■□□□ 1.06
CGREF1-205ENST00000404694 C10orf71Q711Q0 1435 aa21.66■■□□□ 1.06
CGREF1-205ENST00000404694 SNRPA1P09661 255 aaKnown RBP21.66■■□□□ 1.06
CGREF1-205ENST00000404694 GPR162Q16538 588 aa21.66■■□□□ 1.06
CGREF1-205ENST00000404694 PNISRQ8TF01 805 aaKnown RBP21.66■■□□□ 1.06
CGREF1-205ENST00000404694 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
CGREF1-205ENST00000404694 A1BGP04217 495 aa21.65■■□□□ 1.06
CGREF1-205ENST00000404694 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
CGREF1-205ENST00000404694 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
CGREF1-205ENST00000404694 PARP3Q9Y6F1 533 aa21.65■■□□□ 1.06
CGREF1-205ENST00000404694 IL6STP40189 918 aaPredicted RBP21.64■■□□□ 1.06
CGREF1-205ENST00000404694 LMOD3Q0VAK6 560 aa21.64■■□□□ 1.06
CGREF1-205ENST00000404694 CCDC184Q52MB2 194 aa21.64■■□□□ 1.06
CGREF1-205ENST00000404694 DDR1Q08345 913 aa21.63■■□□□ 1.05
CGREF1-205ENST00000404694 BCL2L12Q9HB09 334 aa21.63■■□□□ 1.05
CGREF1-205ENST00000404694 CHD4Q14839 1912 aa21.63■■□□□ 1.05
CGREF1-205ENST00000404694 A0A087WZG4 1122 aa21.62■■□□□ 1.05
CGREF1-205ENST00000404694 ZNF330Q9Y3S2 320 aaPredicted RBP21.62■■□□□ 1.05
CGREF1-205ENST00000404694 BCORQ6W2J9 1755 aa21.62■■□□□ 1.05
CGREF1-205ENST00000404694 N4BP2Q86UW6 1770 aaPredicted RBP21.62■■□□□ 1.05
CGREF1-205ENST00000404694 PXDNLA1KZ92 1463 aa21.62■■□□□ 1.05
CGREF1-205ENST00000404694 YBX3P16989 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
CGREF1-205ENST00000404694 TM4SF1P30408 202 aa21.61■■□□□ 1.05
CGREF1-205ENST00000404694 NEUROD2Q15784 382 aa21.61■■□□□ 1.05
CGREF1-205ENST00000404694 AFDNP55196 1824 aaKnown RBP21.61■■□□□ 1.05
CGREF1-205ENST00000404694 POLRMTO00411 1230 aaKnown RBP21.61■■□□□ 1.05
CGREF1-205ENST00000404694 YY1P25490 414 aa21.61■■□□□ 1.05
CGREF1-205ENST00000404694 PIP4K2AP48426 406 aaPredicted RBP21.61■■□□□ 1.05
CGREF1-205ENST00000404694 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
CGREF1-205ENST00000404694 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
CGREF1-205ENST00000404694 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
CGREF1-205ENST00000404694 NFIXQ14938 502 aa21.59■■□□□ 1.05
CGREF1-205ENST00000404694 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
CGREF1-205ENST00000404694 TSPYL4Q9UJ04 414 aa21.59■■□□□ 1.05
CGREF1-205ENST00000404694 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
CGREF1-205ENST00000404694 TBC1D2BQ9UPU7 963 aa21.59■■□□□ 1.05
CGREF1-205ENST00000404694 GIGYF1O75420 1035 aaPredicted RBP21.58■■□□□ 1.04
CGREF1-205ENST00000404694 BRCA1P38398 1863 aaKnown RBP21.57■■□□□ 1.04
CGREF1-205ENST00000404694 TGFB2P61812 414 aa21.57■■□□□ 1.04
CGREF1-205ENST00000404694 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
CGREF1-205ENST00000404694 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
CGREF1-205ENST00000404694 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
CGREF1-205ENST00000404694 DZIP3Q86Y13 1208 aaKnown RBP21.56■■□□□ 1.04
CGREF1-205ENST00000404694 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
CGREF1-205ENST00000404694 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
CGREF1-205ENST00000404694 GRIN3BO60391 1043 aa21.55■■□□□ 1.04
CGREF1-205ENST00000404694 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
CGREF1-205ENST00000404694 TBC1D9BQ66K14 1250 aa21.54■■□□□ 1.04
CGREF1-205ENST00000404694 A0A0G2JLW4 131 aa21.53■■□□□ 1.04
CGREF1-205ENST00000404694 APAF1O14727 1248 aa21.53■■□□□ 1.04
CGREF1-205ENST00000404694 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
CGREF1-205ENST00000404694 FAM9BQ8IZU0 186 aa21.53■■□□□ 1.04
CGREF1-205ENST00000404694 SERPINB2P05120 415 aa21.52■■□□□ 1.04
CGREF1-205ENST00000404694 DPEP1P16444 411 aa21.52■■□□□ 1.04
CGREF1-205ENST00000404694 CARMIL3Q8ND23 1372 aa21.5■■□□□ 1.03
CGREF1-205ENST00000404694 CHL1O00533 1208 aa21.5■■□□□ 1.03
CGREF1-205ENST00000404694 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
CGREF1-205ENST00000404694 KCNA3P22001 575 aa21.49■■□□□ 1.03
CGREF1-205ENST00000404694 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
CGREF1-205ENST00000404694 DLEC1Q9Y238 1755 aa21.49■■□□□ 1.03
CGREF1-205ENST00000404694 ANKRD31Q8N7Z5 1873 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 CLEC4GQ6UXB4 293 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 BCS1LQ9Y276 419 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 ARFGEF1Q9Y6D6 1849 aa21.48■■□□□ 1.03
CGREF1-205ENST00000404694 RGL2O15211 777 aa21.47■■□□□ 1.03
CGREF1-205ENST00000404694 MYL6BP14649 208 aa21.47■■□□□ 1.03
CGREF1-205ENST00000404694 CHRNA5P30532 468 aa21.47■■□□□ 1.03
CGREF1-205ENST00000404694 CFAP44Q96MT7 982 aa21.47■■□□□ 1.03
CGREF1-205ENST00000404694 SETDB2Q96T68 719 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms