RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 C1QTNF8P60827 252 aa21.08■□□□□ 0.97
COPS9-202ENST00000403160 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
COPS9-202ENST00000403160 SIPA1L3O60292 1781 aaPredicted RBP21.08■□□□□ 0.96
COPS9-202ENST00000403160 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
COPS9-202ENST00000403160 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
COPS9-202ENST00000403160 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
COPS9-202ENST00000403160 RFC4P35249 363 aa21.06■□□□□ 0.96
COPS9-202ENST00000403160 TMPOP42166 694 aaKnown RBP21.06■□□□□ 0.96
COPS9-202ENST00000403160 GOLGA2Q08379 1002 aa21.06■□□□□ 0.96
COPS9-202ENST00000403160 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
COPS9-202ENST00000403160 ARHGEF1Q92888 912 aaKnown RBP21.06■□□□□ 0.96
COPS9-202ENST00000403160 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
COPS9-202ENST00000403160 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
COPS9-202ENST00000403160 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
COPS9-202ENST00000403160 ZNF790Q6PG37 636 aa21.04■□□□□ 0.96
COPS9-202ENST00000403160 CCDC87Q9NVE4 849 aa21.04■□□□□ 0.96
COPS9-202ENST00000403160 C4AP0C0L4 1744 aa21.04■□□□□ 0.96
COPS9-202ENST00000403160 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
COPS9-202ENST00000403160 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
COPS9-202ENST00000403160 MCM10Q7L590 875 aa21.03■□□□□ 0.96
COPS9-202ENST00000403160 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
COPS9-202ENST00000403160 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
COPS9-202ENST00000403160 CYP19A1P11511 503 aaPredicted RBP21.02■□□□□ 0.96
COPS9-202ENST00000403160 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
COPS9-202ENST00000403160 NLGN1Q8N2Q7 840 aa21.02■□□□□ 0.96
COPS9-202ENST00000403160 ZNF496Q96IT1 587 aaPredicted RBP21.01■□□□□ 0.95
COPS9-202ENST00000403160 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
COPS9-202ENST00000403160 MMP10P09238 476 aa21■□□□□ 0.95
COPS9-202ENST00000403160 RIPK4P57078 832 aa21■□□□□ 0.95
COPS9-202ENST00000403160 NFE2L2Q16236 605 aa21■□□□□ 0.95
COPS9-202ENST00000403160 FMNL2Q96PY5 1086 aa21■□□□□ 0.95
COPS9-202ENST00000403160 DLG5Q8TDM6 1919 aa21■□□□□ 0.95
COPS9-202ENST00000403160 HEG1Q9ULI3 1381 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 E9PSI1 815 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 STARD3NLO95772 234 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 GYS1P13807 737 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 DCTN1Q14203 1278 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 WDR63Q8IWG1 891 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
COPS9-202ENST00000403160 TRIM35Q9UPQ4 493 aa20.99■□□□□ 0.95
COPS9-202ENST00000403160 TEX13AQ9BXU3 409 aaPredicted RBP20.98■□□□□ 0.95
COPS9-202ENST00000403160 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
COPS9-202ENST00000403160 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
COPS9-202ENST00000403160 TRMT2AQ8IZ69 625 aaKnown RBP20.97■□□□□ 0.95
COPS9-202ENST00000403160 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
COPS9-202ENST00000403160 ZBTB1Q9Y2K1 713 aa20.97■□□□□ 0.95
COPS9-202ENST00000403160 KCNQ3O43525 872 aa20.96■□□□□ 0.95
COPS9-202ENST00000403160 ZPR1O75312 459 aa20.96■□□□□ 0.95
COPS9-202ENST00000403160 GOLGB1Q14789 3259 aaKnown RBP20.95■□□□□ 0.94
COPS9-202ENST00000403160 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
COPS9-202ENST00000403160 COL15A1P39059 1388 aa20.95■□□□□ 0.94
COPS9-202ENST00000403160 NEFLP07196 543 aa20.94■□□□□ 0.94
COPS9-202ENST00000403160 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
COPS9-202ENST00000403160 PARP3Q9Y6F1 533 aa20.94■□□□□ 0.94
COPS9-202ENST00000403160 TGFB2P61812 414 aa20.93■□□□□ 0.94
COPS9-202ENST00000403160 FKBP8Q14318 412 aa20.93■□□□□ 0.94
COPS9-202ENST00000403160 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
COPS9-202ENST00000403160 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
COPS9-202ENST00000403160 NARFQ9UHQ1 456 aa20.92■□□□□ 0.94
COPS9-202ENST00000403160 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
COPS9-202ENST00000403160 LMOD3Q0VAK6 560 aa20.91■□□□□ 0.94
COPS9-202ENST00000403160 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
COPS9-202ENST00000403160 IL16Q14005 1332 aa20.9■□□□□ 0.94
COPS9-202ENST00000403160 A0A087WZG4 1122 aa20.9■□□□□ 0.94
COPS9-202ENST00000403160 SNRPA1P09661 255 aaKnown RBP20.9■□□□□ 0.94
COPS9-202ENST00000403160 MIS18AQ9NYP9 233 aa20.9■□□□□ 0.94
COPS9-202ENST00000403160 ZNF330Q9Y3S2 320 aaPredicted RBP20.9■□□□□ 0.94
COPS9-202ENST00000403160 KIF13BQ9NQT8 1826 aa20.9■□□□□ 0.94
COPS9-202ENST00000403160 ADCY9O60503 1353 aa20.89■□□□□ 0.93
COPS9-202ENST00000403160 EIF5P55010 431 aaKnown RBP20.89■□□□□ 0.93
COPS9-202ENST00000403160 NPM2Q86SE8 214 aaKnown RBP20.89■□□□□ 0.93
COPS9-202ENST00000403160 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
COPS9-202ENST00000403160 WWC3Q9ULE0 1092 aa20.89■□□□□ 0.93
COPS9-202ENST00000403160 C10orf71Q711Q0 1435 aa20.88■□□□□ 0.93
COPS9-202ENST00000403160 A1BGP04217 495 aa20.88■□□□□ 0.93
COPS9-202ENST00000403160 IL6STP40189 918 aaPredicted RBP20.88■□□□□ 0.93
COPS9-202ENST00000403160 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
COPS9-202ENST00000403160 RNF123Q5XPI4 1314 aa20.87■□□□□ 0.93
COPS9-202ENST00000403160 DDR1Q08345 913 aa20.87■□□□□ 0.93
COPS9-202ENST00000403160 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
COPS9-202ENST00000403160 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
COPS9-202ENST00000403160 PRAMEF22A3QJZ6 481 aa20.86■□□□□ 0.93
COPS9-202ENST00000403160 TM4SF1P30408 202 aa20.86■□□□□ 0.93
COPS9-202ENST00000403160 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
COPS9-202ENST00000403160 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
COPS9-202ENST00000403160 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
COPS9-202ENST00000403160 CALD1Q05682 793 aaKnown RBP20.85■□□□□ 0.93
COPS9-202ENST00000403160 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
COPS9-202ENST00000403160 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
COPS9-202ENST00000403160 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
COPS9-202ENST00000403160 NFIXQ14938 502 aa20.84■□□□□ 0.93
COPS9-202ENST00000403160 BCL2L12Q9HB09 334 aa20.84■□□□□ 0.93
COPS9-202ENST00000403160 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
COPS9-202ENST00000403160 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.93
COPS9-202ENST00000403160 TBC1D2BQ9UPU7 963 aa20.83■□□□□ 0.93
COPS9-202ENST00000403160 KIAA1551Q9HCM1 1747 aa20.83■□□□□ 0.92
COPS9-202ENST00000403160 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms