RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 USP42Q9H9J4 1324 aaKnown RBP11.29□□□□□ -0.6
RFKP1-201ENST00000400940 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
RFKP1-201ENST00000400940 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
RFKP1-201ENST00000400940 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
RFKP1-201ENST00000400940 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
RFKP1-201ENST00000400940 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
RFKP1-201ENST00000400940 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
RFKP1-201ENST00000400940 TOMM70O94826 608 aa11.26□□□□□ -0.61
RFKP1-201ENST00000400940 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
RFKP1-201ENST00000400940 RFC4P35249 363 aa11.25□□□□□ -0.61
RFKP1-201ENST00000400940 APLP1P51693 650 aa11.25□□□□□ -0.61
RFKP1-201ENST00000400940 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
RFKP1-201ENST00000400940 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
RFKP1-201ENST00000400940 KCNA3P22001 575 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 IL13P35225 146 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
RFKP1-201ENST00000400940 MTHFSP49914 203 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 CABP4P57796 275 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
RFKP1-201ENST00000400940 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
RFKP1-201ENST00000400940 PANK3Q9H999 370 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
RFKP1-201ENST00000400940 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
RFKP1-201ENST00000400940 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
RFKP1-201ENST00000400940 LAMB4A4D0S4 1761 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 HSPA5P11021 654 aaKnown RBP11.22□□□□□ -0.61
RFKP1-201ENST00000400940 TM4SF1P30408 202 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 COL15A1P39059 1388 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 FSTL1Q12841 308 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
RFKP1-201ENST00000400940 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
RFKP1-201ENST00000400940 DPEP1P16444 411 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 DDR1Q08345 913 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 INTS5Q6P9B9 1019 aaKnown RBP11.21□□□□□ -0.61
RFKP1-201ENST00000400940 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 MORC1Q86VD1 984 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
RFKP1-201ENST00000400940 KDM2BQ8NHM5 1336 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 FCHSD2O94868 740 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
RFKP1-201ENST00000400940 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 DNAJC5GQ8N7S2 189 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 NARFQ9UHQ1 456 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 SCN4AP35499 1836 aa11.2□□□□□ -0.62
RFKP1-201ENST00000400940 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
RFKP1-201ENST00000400940 CYP19A1P11511 503 aaPredicted RBP11.19□□□□□ -0.62
RFKP1-201ENST00000400940 FKBP8Q14318 412 aa11.19□□□□□ -0.62
RFKP1-201ENST00000400940 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
RFKP1-201ENST00000400940 RGL2O15211 777 aa11.18□□□□□ -0.62
RFKP1-201ENST00000400940 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
RFKP1-201ENST00000400940 TNNT2P45379 298 aaPredicted RBP11.18□□□□□ -0.62
RFKP1-201ENST00000400940 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
RFKP1-201ENST00000400940 RNMTO43148 476 aaKnown RBP11.17□□□□□ -0.62
RFKP1-201ENST00000400940 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
RFKP1-201ENST00000400940 ZNF526Q8TF50 670 aaPredicted RBP11.17□□□□□ -0.62
RFKP1-201ENST00000400940 KIF7Q2M1P5 1343 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 ZPR1O75312 459 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 NMRK2Q9NPI5 230 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
RFKP1-201ENST00000400940 KDM3BQ7LBC6 1761 aa11.16□□□□□ -0.62
RFKP1-201ENST00000400940 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
RFKP1-201ENST00000400940 LTBP3Q9NS15 1303 aa11.15□□□□□ -0.62
RFKP1-201ENST00000400940 EIF5P55010 431 aaKnown RBP11.15□□□□□ -0.62
RFKP1-201ENST00000400940 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
RFKP1-201ENST00000400940 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
RFKP1-201ENST00000400940 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
RFKP1-201ENST00000400940 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
RFKP1-201ENST00000400940 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.63
RFKP1-201ENST00000400940 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
RFKP1-201ENST00000400940 SLX4Q8IY92 1834 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 A0A087WZG4 1122 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 STARD3NLO95772 234 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 LMNB1P20700 586 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 NFIXQ14938 502 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
RFKP1-201ENST00000400940 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
RFKP1-201ENST00000400940 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
RFKP1-201ENST00000400940 IL6STP40189 918 aaPredicted RBP11.13□□□□□ -0.63
RFKP1-201ENST00000400940 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
RFKP1-201ENST00000400940 SMC1BQ8NDV3 1235 aa11.13□□□□□ -0.63
RFKP1-201ENST00000400940 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
RFKP1-201ENST00000400940 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
RFKP1-201ENST00000400940 NUP98P52948 1817 aa11.12□□□□□ -0.63
RFKP1-201ENST00000400940 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
RFKP1-201ENST00000400940 TTLL6Q8N841 843 aa11.12□□□□□ -0.63
RFKP1-201ENST00000400940 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
RFKP1-201ENST00000400940 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
RFKP1-201ENST00000400940 RIC1Q4ADV7 1423 aa11.11□□□□□ -0.63
RFKP1-201ENST00000400940 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms