RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 POTEAQ6S8J7 498 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 PI4KAP2A4QPH2 592 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 NBPF14Q5TI25 921 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 NBPF10Q6P3W6 841 aaKnown RBP14.88□□□□□ -0.03
SKA3-203ENST00000400018 NBPF15Q8N660 670 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
SKA3-203ENST00000400018 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
SKA3-203ENST00000400018 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
SKA3-203ENST00000400018 C5P01031 1676 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 KDM3BQ7LBC6 1761 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 ERVV-2B6SEH9 535 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 BARGINQ6ZT62 677 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 MEIS3Q99687 375 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 RGS12O14924 1447 aa14.87□□□□□ -0.03
SKA3-203ENST00000400018 SIPA1L3O60292 1781 aaPredicted RBP14.87□□□□□ -0.03
SKA3-203ENST00000400018 CWF19L2Q2TBE0 894 aaKnown RBP14.86□□□□□ -0.03
SKA3-203ENST00000400018 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
SKA3-203ENST00000400018 COPS6Q7L5N1 327 aa14.86□□□□□ -0.03
SKA3-203ENST00000400018 XAGE3Q8WTP9 111 aa14.86□□□□□ -0.03
SKA3-203ENST00000400018 THRAP3Q9Y2W1 955 aaKnown RBP14.86□□□□□ -0.03
SKA3-203ENST00000400018 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
SKA3-203ENST00000400018 ATP5J2-PTCD1G3V325 749 aa14.85□□□□□ -0.03
SKA3-203ENST00000400018 CT47B1P0C2W7 299 aaPredicted RBP14.85□□□□□ -0.03
SKA3-203ENST00000400018 ITGB4P16144 1822 aa14.85□□□□□ -0.03
SKA3-203ENST00000400018 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
SKA3-203ENST00000400018 NWD2Q9ULI1 1742 aa14.85□□□□□ -0.03
SKA3-203ENST00000400018 SNRPA1P09661 255 aaKnown RBP14.85□□□□□ -0.03
SKA3-203ENST00000400018 ZBTB3Q9H5J0 574 aa14.85□□□□□ -0.03
SKA3-203ENST00000400018 APBB1O00213 710 aa14.84□□□□□ -0.03
SKA3-203ENST00000400018 TRIM37O94972 964 aa14.84□□□□□ -0.03
SKA3-203ENST00000400018 PDE3AQ14432 1141 aa14.84□□□□□ -0.03
SKA3-203ENST00000400018 ITPK1Q13572 414 aa14.84□□□□□ -0.03
SKA3-203ENST00000400018 MAP3K2Q9Y2U5 619 aa14.84□□□□□ -0.03
SKA3-203ENST00000400018 BCL9O00512 1426 aa14.83□□□□□ -0.04
SKA3-203ENST00000400018 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
SKA3-203ENST00000400018 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
SKA3-203ENST00000400018 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
SKA3-203ENST00000400018 ADAMTS7Q9UKP4 1686 aa14.83□□□□□ -0.04
SKA3-203ENST00000400018 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
SKA3-203ENST00000400018 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
SKA3-203ENST00000400018 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
SKA3-203ENST00000400018 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
SKA3-203ENST00000400018 ATRNO75882 1429 aa14.82□□□□□ -0.04
SKA3-203ENST00000400018 DBF4Q9UBU7 674 aaPredicted RBP14.81□□□□□ -0.04
SKA3-203ENST00000400018 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 KCPQ6ZWJ8 1503 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 ABCC4O15439 1325 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 ADCY9O60503 1353 aa14.81□□□□□ -0.04
SKA3-203ENST00000400018 NBPF7P0C2Y1 421 aaPredicted RBP14.8□□□□□ -0.04
SKA3-203ENST00000400018 MRC1P22897 1456 aa14.8□□□□□ -0.04
SKA3-203ENST00000400018 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
SKA3-203ENST00000400018 RGS3P49796 1198 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 LOC102724428A0A0B4J2F2 783 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 SIK1P57059 783 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 SIRT2Q8IXJ6 389 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 MYD88Q99836 296 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 DDX21Q9NR30 783 aaKnown RBP eCLIP14.79□□□□□ -0.04
SKA3-203ENST00000400018 ZBTB40Q9NUA8 1239 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 BABAM1Q9NWV8 329 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 SYNE4Q8N205 404 aa14.79□□□□□ -0.04
SKA3-203ENST00000400018 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
SKA3-203ENST00000400018 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
SKA3-203ENST00000400018 PALLDQ8WX93 1383 aa14.78□□□□□ -0.04
SKA3-203ENST00000400018 MSH5O43196 834 aa14.78□□□□□ -0.04
SKA3-203ENST00000400018 ILDR1Q86SU0 546 aaPredicted RBP14.78□□□□□ -0.04
SKA3-203ENST00000400018 KRT27Q7Z3Y8 459 aa14.78□□□□□ -0.04
SKA3-203ENST00000400018 GPTP24298 496 aa14.77□□□□□ -0.04
SKA3-203ENST00000400018 BRWD3Q6RI45 1802 aa14.77□□□□□ -0.05
SKA3-203ENST00000400018 HLFQ16534 295 aa14.77□□□□□ -0.05
SKA3-203ENST00000400018 DNAAF4Q8WXU2 420 aa14.77□□□□□ -0.05
SKA3-203ENST00000400018 DDX19BQ9UMR2 479 aa14.77□□□□□ -0.05
SKA3-203ENST00000400018 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
SKA3-203ENST00000400018 CYP19A1P11511 503 aaPredicted RBP14.76□□□□□ -0.05
SKA3-203ENST00000400018 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
SKA3-203ENST00000400018 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
SKA3-203ENST00000400018 CCDC85AQ96PX6 553 aaPredicted RBP14.76□□□□□ -0.05
SKA3-203ENST00000400018 PHF14O94880 888 aa14.76□□□□□ -0.05
SKA3-203ENST00000400018 RXRBP28702 533 aa14.76□□□□□ -0.05
SKA3-203ENST00000400018 USP44Q9H0E7 712 aa14.76□□□□□ -0.05
SKA3-203ENST00000400018 LRRC4BQ9NT99 713 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 LRRFIP2Q9Y608 721 aaKnown RBP14.75□□□□□ -0.05
SKA3-203ENST00000400018 CRKLP46109 303 aaKnown RBP14.75□□□□□ -0.05
SKA3-203ENST00000400018 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 ARHGAP45Q92619 1136 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 PTPRCP08575 1304 aa14.75□□□□□ -0.05
SKA3-203ENST00000400018 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
SKA3-203ENST00000400018 PNMA6EA0A0J9YXQ4 647 aa14.74□□□□□ -0.05
SKA3-203ENST00000400018 ONECUT3O60422 494 aaPredicted RBP14.74□□□□□ -0.05
SKA3-203ENST00000400018 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
SKA3-203ENST00000400018 HYPKQ9NX55 129 aa14.73□□□□□ -0.05
SKA3-203ENST00000400018 HOXB7P09629 217 aa14.73□□□□□ -0.05
SKA3-203ENST00000400018 ZNF772Q68DY9 489 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms