RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 JRKLQ9Y4A0 524 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-203ENST00000399916 STK3Q13188 491 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-203ENST00000399916 C16orf71Q8IYS4 520 aaPredicted RBP16.15■□□□□ 0.18
RUNX3-203ENST00000399916 TRIM66O15016 1216 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 CASQ1P31415 396 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 EID1Q9Y6B2 187 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
RUNX3-203ENST00000399916 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
RUNX3-203ENST00000399916 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
RUNX3-203ENST00000399916 SARNPP82979 210 aaKnown RBP16.14■□□□□ 0.17
RUNX3-203ENST00000399916 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
RUNX3-203ENST00000399916 MCM2P49736 904 aa16.14■□□□□ 0.17
RUNX3-203ENST00000399916 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
RUNX3-203ENST00000399916 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
RUNX3-203ENST00000399916 KINO60870 393 aaKnown RBP16.14■□□□□ 0.17
RUNX3-203ENST00000399916 KRT85P78386 507 aa16.14■□□□□ 0.17
RUNX3-203ENST00000399916 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
RUNX3-203ENST00000399916 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
RUNX3-203ENST00000399916 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
RUNX3-203ENST00000399916 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
RUNX3-203ENST00000399916 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.13■□□□□ 0.17
RUNX3-203ENST00000399916 LIG1P18858 919 aa16.13■□□□□ 0.17
RUNX3-203ENST00000399916 MX1P20591 662 aa16.13■□□□□ 0.17
RUNX3-203ENST00000399916 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
RUNX3-203ENST00000399916 ANO6Q4KMQ2 910 aa16.13■□□□□ 0.17
RUNX3-203ENST00000399916 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 ICE2Q659A1 982 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 GBP6Q6ZN66 633 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
RUNX3-203ENST00000399916 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 NF2P35240 595 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 NCBP1Q09161 790 aaKnown RBP16.12■□□□□ 0.17
RUNX3-203ENST00000399916 JAKMIP3Q5VZ66 844 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 MYO1CO00159 1063 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 ERLIN1O75477 346 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 NEBLO76041 1014 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 SERPINC1P01008 464 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 OAS2P29728 719 aaKnown RBP16.12■□□□□ 0.17
RUNX3-203ENST00000399916 GNAI1P63096 354 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
RUNX3-203ENST00000399916 SYNMO15061 1565 aa16.12■□□□□ 0.17
RUNX3-203ENST00000399916 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
RUNX3-203ENST00000399916 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
RUNX3-203ENST00000399916 TSHZ3Q63HK5 1081 aa16.11■□□□□ 0.17
RUNX3-203ENST00000399916 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
RUNX3-203ENST00000399916 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
RUNX3-203ENST00000399916 FAM107BQ9H098 131 aa16.11■□□□□ 0.17
RUNX3-203ENST00000399916 CABP1Q9NZU7 370 aa16.11■□□□□ 0.17
RUNX3-203ENST00000399916 IVLP07476 585 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 DNAJC25Q9H1X3 360 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 LRCH2Q5VUJ6 765 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 RPAINQ86UA6 219 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 EFCC1Q9HA90 598 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 PTPRTO14522 1441 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 TPM1P09493 284 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
RUNX3-203ENST00000399916 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
RUNX3-203ENST00000399916 NAT10Q9H0A0 1025 aaKnown RBP16.1■□□□□ 0.17
RUNX3-203ENST00000399916 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 ATP2C2O75185 946 aa16.09■□□□□ 0.17
RUNX3-203ENST00000399916 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
RUNX3-203ENST00000399916 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 MAST1Q9Y2H9 1570 aa16.09■□□□□ 0.17
RUNX3-203ENST00000399916 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
RUNX3-203ENST00000399916 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
RUNX3-203ENST00000399916 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
RUNX3-203ENST00000399916 UBE2HP62256 183 aa16.08■□□□□ 0.17
RUNX3-203ENST00000399916 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.17
RUNX3-203ENST00000399916 PDRG1Q9NUG6 133 aa16.08■□□□□ 0.17
RUNX3-203ENST00000399916 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.17
RUNX3-203ENST00000399916 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 ZBTB7BO15156 539 aaPredicted RBP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 PLEKHA4Q9H4M7 779 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 FEZ2Q9UHY8 353 aaPredicted RBP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 ABCC1P33527 1531 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 SSBP05455 408 aaKnown RBP eCLIP16.08■□□□□ 0.16
RUNX3-203ENST00000399916 PDE6BP35913 854 aa16.08■□□□□ 0.16
RUNX3-203ENST00000399916 CAGE1Q8TC20 777 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms