RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 PAXBP1Q9Y5B6 917 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
LAMA3-203ENST00000399516 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 GJB2P29033 226 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
LAMA3-203ENST00000399516 GOLGA8BA8MQT2 603 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 CAVIN2O95810 425 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 MCM10Q7L590 875 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
LAMA3-203ENST00000399516 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
LAMA3-203ENST00000399516 TRIM27P14373 513 aa13.05□□□□□ -0.32
LAMA3-203ENST00000399516 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-203ENST00000399516 LRP2BPQ9P2M1 347 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 UVSSAQ2YD98 709 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 GCOM1H8Y6P7 765 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-203ENST00000399516 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-203ENST00000399516 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
LAMA3-203ENST00000399516 UBE2HP62256 183 aa13.04□□□□□ -0.32
LAMA3-203ENST00000399516 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
LAMA3-203ENST00000399516 GOLGA6L10A0A0M3HER8 536 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 ZNF76P36508 570 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 LMAN1P49257 510 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 CACNA2D4Q7Z3S7 1137 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
LAMA3-203ENST00000399516 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 CCDC196A0A1B0GTZ2 297 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 TICAM2Q86XR7 235 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 DNA2P51530 1060 aa13.03□□□□□ -0.32
LAMA3-203ENST00000399516 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 TTC22Q5TAA0 569 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.32
LAMA3-203ENST00000399516 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 KLHL34Q8N239 644 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 AKAP2Q9Y2D5 859 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.32
LAMA3-203ENST00000399516 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 FGFR1OPO95684 399 aaKnown RBP13.02□□□□□ -0.33
LAMA3-203ENST00000399516 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
LAMA3-203ENST00000399516 CETN2P41208 172 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 LRSAM1Q6UWE0 723 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
LAMA3-203ENST00000399516 EHBP1Q8NDI1 1231 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.01□□□□□ -0.33
LAMA3-203ENST00000399516 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
LAMA3-203ENST00000399516 LIG1P18858 919 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
LAMA3-203ENST00000399516 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 CCDC175P0C221 793 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 BIN1O00499 593 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 PTPRCP08575 1304 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 CLCN1P35523 988 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
LAMA3-203ENST00000399516 NSD2O96028 1365 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
LAMA3-203ENST00000399516 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 ZNF165P49910 485 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 METTL24Q5JXM2 366 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 TOPBP1Q92547 1522 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 PAFAH1B1P43034 410 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 MAATS1Q7Z4T9 603 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
LAMA3-203ENST00000399516 USP5P45974 858 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
LAMA3-203ENST00000399516 CPLX3Q8WVH0 158 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 NAA15Q9BXJ9 866 aaKnown RBP13□□□□□ -0.33
LAMA3-203ENST00000399516 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
LAMA3-203ENST00000399516 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
LAMA3-203ENST00000399516 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
LAMA3-203ENST00000399516 NAPBQ9H115 298 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
LAMA3-203ENST00000399516 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
LAMA3-203ENST00000399516 CEP112Q8N8E3 955 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 NESP48681 1621 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
LAMA3-203ENST00000399516 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
LAMA3-203ENST00000399516 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms