RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 SLC5A1P13866 664 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 PPP1R42Q7Z4L9 355 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 TANGO6Q9C0B7 1094 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 ZPR1O75312 459 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 SSFA2P28290 1259 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 TMEM132AQ24JP5 1023 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 ZBTB3Q9H5J0 574 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 DEF6Q9H4E7 631 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 FBLN1P23142 703 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 CAMK4Q16566 473 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
ABCC1-201ENST00000399408 FILIP1Q7Z7B0 1213 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 TXLNBQ8N3L3 684 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 MINDY4BA8MYZ0 360 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 CCDC183Q5T5S1 534 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 PIBF1Q8WXW3 757 aa17.91■□□□□ 0.46
ABCC1-201ENST00000399408 TNPO1Q92973 898 aaKnown RBP17.9■□□□□ 0.46
ABCC1-201ENST00000399408 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
ABCC1-201ENST00000399408 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
ABCC1-201ENST00000399408 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
ABCC1-201ENST00000399408 C8orf76Q96K31 380 aa17.9■□□□□ 0.46
ABCC1-201ENST00000399408 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
ABCC1-201ENST00000399408 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
ABCC1-201ENST00000399408 ZNF213O14771 459 aa17.9■□□□□ 0.46
ABCC1-201ENST00000399408 SSBP05455 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABCC1-201ENST00000399408 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
ABCC1-201ENST00000399408 USP5P45974 858 aa17.89■□□□□ 0.45
ABCC1-201ENST00000399408 NUCB1Q02818 461 aa17.89■□□□□ 0.45
ABCC1-201ENST00000399408 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
ABCC1-201ENST00000399408 PATL2C9JE40 543 aaKnown RBP17.89■□□□□ 0.45
ABCC1-201ENST00000399408 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
ABCC1-201ENST00000399408 CWC25Q9NXE8 425 aaPredicted RBP17.89■□□□□ 0.45
ABCC1-201ENST00000399408 EXOC5O00471 708 aa17.88■□□□□ 0.45
ABCC1-201ENST00000399408 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
ABCC1-201ENST00000399408 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
ABCC1-201ENST00000399408 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 RNF41Q9H4P4 317 aaPredicted RBP17.87■□□□□ 0.45
ABCC1-201ENST00000399408 ZSCAN30Q86W11 494 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 POLR3DP05423 398 aaPredicted RBP17.87■□□□□ 0.45
ABCC1-201ENST00000399408 CTCFLQ8NI51 663 aaPredicted RBP17.87■□□□□ 0.45
ABCC1-201ENST00000399408 CNKSR2Q8WXI2 1034 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 MKNK2Q9HBH9 465 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 WDR7Q9Y4E6 1490 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 ANO10Q9NW15 660 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 SLC12A7Q9Y666 1083 aa17.87■□□□□ 0.45
ABCC1-201ENST00000399408 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 GPTP24298 496 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 CADPS2Q86UW7 1296 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 DZIP1Q86YF9 867 aaKnown RBP17.86■□□□□ 0.45
ABCC1-201ENST00000399408 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 KIAA0556O60303 1618 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 EIF2AK4Q9P2K8 1649 aaKnown RBP17.86■□□□□ 0.45
ABCC1-201ENST00000399408 GOLIM4O00461 696 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 ADAMTS2O95450 1211 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 NOM1Q5C9Z4 860 aaKnown RBP17.86■□□□□ 0.45
ABCC1-201ENST00000399408 TESK2Q96S53 571 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
ABCC1-201ENST00000399408 IQCA1Q86XH1 822 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 FAM177A1Q8N128 213 aaPredicted RBP17.85■□□□□ 0.45
ABCC1-201ENST00000399408 MEIS3Q99687 375 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
ABCC1-201ENST00000399408 ANKIB1Q9P2G1 1089 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
ABCC1-201ENST00000399408 CTTNBP2Q8WZ74 1663 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 ZNF76P36508 570 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 RBM10P98175 930 aaKnown RBP17.85■□□□□ 0.45
ABCC1-201ENST00000399408 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
ABCC1-201ENST00000399408 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 GOLGA8BA8MQT2 603 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 CCDC181Q5TID7 509 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
ABCC1-201ENST00000399408 ANXA1P04083 346 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
ABCC1-201ENST00000399408 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 WDR62O43379 1518 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
ABCC1-201ENST00000399408 GUCY1B3Q02153 619 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
ABCC1-201ENST00000399408 GJB2P29033 226 aa17.83■□□□□ 0.45
ABCC1-201ENST00000399408 ANKRD44Q8N8A2 993 aa17.83■□□□□ 0.45
ABCC1-201ENST00000399408 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.45
ABCC1-201ENST00000399408 EIF4A2Q14240 407 aaKnown RBP17.83■□□□□ 0.45
ABCC1-201ENST00000399408 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.45
ABCC1-201ENST00000399408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.449e-7■■■■■ 148.5
ABCC1-201ENST00000399408 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
ABCC1-201ENST00000399408 CWC15Q9P013 229 aaKnown RBP17.83■□□□□ 0.44
ABCC1-201ENST00000399408 CTAGE5O15320 804 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms