RNA–Protein interactions for RNA: ENST00000399287.7

HPS5-204, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best)

Gene HPS5, Length 711 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-204ENST00000399287 RFC4P35249 363 aa15.41■□□□□ 0.06
HPS5-204ENST00000399287 CRKLP46109 303 aaKnown RBP15.41■□□□□ 0.06
HPS5-204ENST00000399287 NFATC2IPQ8NCF5 419 aa15.41■□□□□ 0.06
HPS5-204ENST00000399287 CCDC87Q9NVE4 849 aa15.41■□□□□ 0.06
HPS5-204ENST00000399287 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
HPS5-204ENST00000399287 MTHFSP49914 203 aa15.4■□□□□ 0.06
HPS5-204ENST00000399287 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
HPS5-204ENST00000399287 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
HPS5-204ENST00000399287 CHRNA5P30532 468 aa15.39■□□□□ 0.05
HPS5-204ENST00000399287 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
HPS5-204ENST00000399287 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
HPS5-204ENST00000399287 INTS5Q6P9B9 1019 aaKnown RBP15.39■□□□□ 0.05
HPS5-204ENST00000399287 DNAJC5GQ8N7S2 189 aa15.39■□□□□ 0.05
HPS5-204ENST00000399287 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
HPS5-204ENST00000399287 TOMM70O94826 608 aa15.38■□□□□ 0.05
HPS5-204ENST00000399287 IL13P35225 146 aa15.38■□□□□ 0.05
HPS5-204ENST00000399287 C9orf131Q5VYM1 1079 aa15.38■□□□□ 0.05
HPS5-204ENST00000399287 HTRA3P83110 453 aa15.37■□□□□ 0.05
HPS5-204ENST00000399287 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
HPS5-204ENST00000399287 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
HPS5-204ENST00000399287 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
HPS5-204ENST00000399287 MRC1P22897 1456 aa15.36■□□□□ 0.05
HPS5-204ENST00000399287 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
HPS5-204ENST00000399287 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
HPS5-204ENST00000399287 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
HPS5-204ENST00000399287 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
HPS5-204ENST00000399287 POLRMTO00411 1230 aaKnown RBP15.35■□□□□ 0.05
HPS5-204ENST00000399287 TM4SF1P30408 202 aa15.35■□□□□ 0.05
HPS5-204ENST00000399287 APLP1P51693 650 aa15.35■□□□□ 0.05
HPS5-204ENST00000399287 PIM2Q9P1W9 311 aa15.35■□□□□ 0.05
HPS5-204ENST00000399287 SLC39A6Q13433 755 aa15.34■□□□□ 0.05
HPS5-204ENST00000399287 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
HPS5-204ENST00000399287 TNRC6CQ9HCJ0 1690 aaKnown RBP15.34■□□□□ 0.05
HPS5-204ENST00000399287 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 PRELPP51888 382 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
HPS5-204ENST00000399287 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 SLC52A2Q9HAB3 445 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
HPS5-204ENST00000399287 ANKRD31Q8N7Z5 1873 aa15.32■□□□□ 0.04
HPS5-204ENST00000399287 HMOX1P09601 288 aa15.32■□□□□ 0.04
HPS5-204ENST00000399287 RASSF7Q02833 373 aa15.32■□□□□ 0.04
HPS5-204ENST00000399287 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
HPS5-204ENST00000399287 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
HPS5-204ENST00000399287 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
HPS5-204ENST00000399287 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
HPS5-204ENST00000399287 CYP19A1P11511 503 aaPredicted RBP15.31■□□□□ 0.04
HPS5-204ENST00000399287 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
HPS5-204ENST00000399287 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
HPS5-204ENST00000399287 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
HPS5-204ENST00000399287 COL15A1P39059 1388 aa15.3■□□□□ 0.04
HPS5-204ENST00000399287 NFIXQ14938 502 aa15.3■□□□□ 0.04
HPS5-204ENST00000399287 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
HPS5-204ENST00000399287 RRAGCQ9HB90 399 aa15.3■□□□□ 0.04
HPS5-204ENST00000399287 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
HPS5-204ENST00000399287 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
HPS5-204ENST00000399287 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
HPS5-204ENST00000399287 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
HPS5-204ENST00000399287 MTHFSDQ2M296 383 aaKnown RBP15.29■□□□□ 0.04
HPS5-204ENST00000399287 NARFQ9UHQ1 456 aa15.28■□□□□ 0.04
HPS5-204ENST00000399287 ZPR1O75312 459 aa15.27■□□□□ 0.04
HPS5-204ENST00000399287 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
HPS5-204ENST00000399287 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
HPS5-204ENST00000399287 SCN7AQ01118 1682 aa15.27■□□□□ 0.03
HPS5-204ENST00000399287 KLRG1Q96E93 195 aa15.26■□□□□ 0.03
HPS5-204ENST00000399287 CACNA1SQ13698 1873 aa15.26■□□□□ 0.03
HPS5-204ENST00000399287 COL3A1P02461 1466 aaPredicted RBP15.26■□□□□ 0.03
HPS5-204ENST00000399287 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
HPS5-204ENST00000399287 SERPINB2P05120 415 aa15.25■□□□□ 0.03
HPS5-204ENST00000399287 PPP2R1AP30153 589 aa15.25■□□□□ 0.03
HPS5-204ENST00000399287 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
HPS5-204ENST00000399287 DICER1Q9UPY3 1922 aaKnown RBP15.24■□□□□ 0.03
HPS5-204ENST00000399287 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
HPS5-204ENST00000399287 FSTL1Q12841 308 aa15.24■□□□□ 0.03
HPS5-204ENST00000399287 FER1L6Q2WGJ9 1857 aa15.24■□□□□ 0.03
HPS5-204ENST00000399287 NFKBIEO00221 500 aa15.23■□□□□ 0.03
HPS5-204ENST00000399287 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
HPS5-204ENST00000399287 BICDL1Q6ZP65 573 aa15.23■□□□□ 0.03
HPS5-204ENST00000399287 CCDC24Q8N4L8 307 aa15.23■□□□□ 0.03
HPS5-204ENST00000399287 JMYQ8N9B5 988 aa15.23■□□□□ 0.03
HPS5-204ENST00000399287 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
HPS5-204ENST00000399287 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
HPS5-204ENST00000399287 BCORQ6W2J9 1755 aa15.21■□□□□ 0.03
HPS5-204ENST00000399287 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
HPS5-204ENST00000399287 TBC1D9BQ66K14 1250 aa15.21■□□□□ 0.03
HPS5-204ENST00000399287 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
HPS5-204ENST00000399287 IL17REQ8NFR9 667 aa15.21■□□□□ 0.03
HPS5-204ENST00000399287 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
HPS5-204ENST00000399287 SLX4Q8IY92 1834 aa15.21■□□□□ 0.03
HPS5-204ENST00000399287 POTECB2RU33 542 aa15.2■□□□□ 0.02
HPS5-204ENST00000399287 U2SURPO15042 1029 aaKnown RBP15.2■□□□□ 0.02
HPS5-204ENST00000399287 LMNB1P20700 586 aa15.2■□□□□ 0.02
HPS5-204ENST00000399287 TTLL6Q8N841 843 aa15.2■□□□□ 0.02
HPS5-204ENST00000399287 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
HPS5-204ENST00000399287 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
HPS5-204ENST00000399287 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
HPS5-204ENST00000399287 ARFGEF2Q9Y6D5 1785 aa15.19■□□□□ 0.02
HPS5-204ENST00000399287 KCNQ3O43525 872 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms