RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 RBBP6Q7Z6E9 1792 aaKnown RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 GIGYF1O75420 1035 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 GLIPR1L2Q4G1C9 344 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 SLC10A5Q5PT55 438 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 CLEC4GQ6UXB4 293 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 CACNA1SQ13698 1873 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 PDZRN3Q9UPQ7 1066 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 KDM2BQ8NHM5 1336 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 RABL6Q3YEC7 729 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 CCDC9Q9Y3X0 531 aaKnown RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 CHD4Q14839 1912 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 A0A0G2JMZ2 1700 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 NUTM2BA6NNL0 878 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 NUTM2EB1AL46 878 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 NUTM2AQ8IVF1 878 aaPredicted RBP4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 MRS2Q9HD23 443 aa4.79□□□□□ -1.64
FNDC3A-202ENST00000398316 SIPA1L1O43166 1804 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 RARSP54136 660 aaKnown RBP4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 FAM196AQ6ZSG2 479 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 C15orf52Q6ZUT6 534 aaKnown RBP4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 AEBP1Q8IUX7 1158 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 PARP14Q460N5 1801 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 CAMKK2Q96RR4 588 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 MBIPQ9NS73 344 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 BTG4Q9NY30 223 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 IL6STP40189 918 aaPredicted RBP4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 CC2D1BQ5T0F9 858 aaKnown RBP4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 SULT6B1Q6IMI4 303 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 AMPHP49418 695 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 SALL3Q9BXA9 1300 aa4.78□□□□□ -1.64
FNDC3A-202ENST00000398316 ALDH1L1O75891 902 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 MS4A1P11836 297 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 EIF5P55010 431 aaKnown RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.77□□□□□ -1.651e-6■■□□□ 13.5
FNDC3A-202ENST00000398316 ISCA1Q9BUE6 129 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 PRDM11Q9NQV5 511 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SNRKQ9NRH2 765 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 EPB41L2O43491 1005 aaKnown RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 CYP19A1P11511 503 aaPredicted RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 ZNF790Q6PG37 636 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 AOX1Q06278 1338 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SGIP1Q9BQI5 828 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SPINK5Q9NQ38 1064 aaPredicted RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 DDX21Q9NR30 783 aaKnown RBP eCLIP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 HDAC1Q13547 482 aaPredicted RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 WDR43Q15061 677 aaKnown RBP eCLIP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 INTS5Q6P9B9 1019 aaKnown RBP4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 NGLY1Q96IV0 654 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SLC4A9Q96Q91 983 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 SSFA2P28290 1259 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 MMP14P50281 582 aa4.77□□□□□ -1.65
FNDC3A-202ENST00000398316 PALLDQ8WX93 1383 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 SAFB2Q14151 953 aaKnown RBP eCLIP4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 POLA2Q14181 598 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 USP21Q9UK80 565 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 VPS33BQ9H267 617 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 PHIPQ8WWQ0 1821 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 ZNF34Q8IZ26 560 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 DDX17Q92841 729 aaKnown RBP4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 ZNF512BQ96KM6 892 aaPredicted RBP4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 HYPKQ9NX55 129 aa4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 NOP58Q9Y2X3 529 aaKnown RBP4.76□□□□□ -1.65
FNDC3A-202ENST00000398316 A0A087WZG4 1122 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 GRIPAP1Q4V328 841 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 FLAD1Q8NFF5 587 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 PIGBQ92521 554 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 MYH15Q9Y2K3 1946 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 SNRPA1P09661 255 aaKnown RBP4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 RIPK4P57078 832 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 SLC16A10Q8TF71 515 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 CCDC136Q96JN2 1154 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 CHMP4BQ9H444 224 aaKnown RBP4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 NAV1Q8NEY1 1877 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 CSF1RP07333 972 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 CRY2Q49AN0 593 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 FMNL2Q96PY5 1086 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 GPR108Q9NPR9 543 aa4.75□□□□□ -1.65
FNDC3A-202ENST00000398316 APAF1O14727 1248 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 TM4SF1P30408 202 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 RAPGEF4Q8WZA2 1011 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 MAPK8IP3Q9UPT6 1336 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 LTBP3Q9NS15 1303 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 COL1A1P02452 1464 aaPredicted RBP4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 H7C1W4 665 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 OSBPL3Q9H4L5 887 aa4.74□□□□□ -1.65
FNDC3A-202ENST00000398316 RPS6KA4O75676 772 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 U2AF1L5P0DN76 240 aaPredicted RBP4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 HOXA10P31260 410 aaPredicted RBP4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 U2AF1Q01081 240 aaKnown RBP eCLIP4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 PKNOX2Q96KN3 472 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 EXOC5O00471 708 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 NT5C2P49902 561 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 DDB1Q16531 1140 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 BEND3Q5T5X7 828 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 PLBD2Q8NHP8 589 aa4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 DBF4Q9UBU7 674 aaPredicted RBP4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 ZNF530Q6P9A1 599 aaPredicted RBP4.73□□□□□ -1.65
FNDC3A-202ENST00000398316 YTHDC1Q96MU7 727 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms