RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CABLES1Q8TDN4 633 aa29.06■■■□□ 2.24
PABPN1-202ENST00000397276 GBP4Q96PP9 640 aa29.06■■■□□ 2.24
PABPN1-202ENST00000397276 GRPEL1Q9HAV7 217 aa29.06■■■□□ 2.24
PABPN1-202ENST00000397276 MAP3K2Q9Y2U5 619 aa29.06■■■□□ 2.24
PABPN1-202ENST00000397276 ESYT1Q9BSJ8 1104 aa29.05■■■□□ 2.24
PABPN1-202ENST00000397276 C1orf167Q5SNV9 1468 aa29.05■■■□□ 2.24
PABPN1-202ENST00000397276 MRE11P49959 708 aa29.05■■■□□ 2.24
PABPN1-202ENST00000397276 ADCY9O60503 1353 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 ST18O60284 1047 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 ANO2Q9NQ90 1003 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 MED1Q15648 1581 aaPredicted RBP29.04■■■□□ 2.24
PABPN1-202ENST00000397276 ERBB4Q15303 1308 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 AIMP1Q12904 312 aaKnown RBP29.04■■■□□ 2.24
PABPN1-202ENST00000397276 SLC39A6Q13433 755 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 RHPN1Q8TCX5 695 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 CACNA1FO60840 1977 aa29.04■■■□□ 2.24
PABPN1-202ENST00000397276 ATF3P18847 181 aa29.03■■■□□ 2.24
PABPN1-202ENST00000397276 CHMLP26374 656 aa29.03■■■□□ 2.24
PABPN1-202ENST00000397276 ERBB3P21860 1342 aa29.03■■■□□ 2.24
PABPN1-202ENST00000397276 CWF19L2Q2TBE0 894 aaKnown RBP29.02■■■□□ 2.24
PABPN1-202ENST00000397276 GAS2L3Q86XJ1 694 aa29.02■■■□□ 2.24
PABPN1-202ENST00000397276 STAP2Q9UGK3 403 aa29.02■■■□□ 2.24
PABPN1-202ENST00000397276 POLA2Q14181 598 aa29.02■■■□□ 2.24
PABPN1-202ENST00000397276 CHMP4AQ9BY43 222 aa29.01■■■□□ 2.24
PABPN1-202ENST00000397276 C9orf78Q9NZ63 289 aaPredicted RBP29.01■■■□□ 2.24
PABPN1-202ENST00000397276 SLIT3O75094 1523 aa29.01■■■□□ 2.24
PABPN1-202ENST00000397276 RAPGEF4Q8WZA2 1011 aa29.01■■■□□ 2.23
PABPN1-202ENST00000397276 NEK4P51957 841 aa29■■■□□ 2.23
PABPN1-202ENST00000397276 ZGPATQ8N5A5 531 aaKnown RBP29■■■□□ 2.23
PABPN1-202ENST00000397276 OS9Q13438 667 aaPredicted RBP29■■■□□ 2.23
PABPN1-202ENST00000397276 PKP1Q13835 747 aa28.99■■■□□ 2.23
PABPN1-202ENST00000397276 PALD1Q9ULE6 856 aa28.99■■■□□ 2.23
PABPN1-202ENST00000397276 RAB11FIP3O75154 756 aa28.99■■■□□ 2.23
PABPN1-202ENST00000397276 CHRNA2Q15822 529 aa28.99■■■□□ 2.23
PABPN1-202ENST00000397276 CSB-PGBD3P0DP91 1061 aa28.98■■■□□ 2.23
PABPN1-202ENST00000397276 IL25Q9H293 177 aa28.98■■■□□ 2.23
PABPN1-202ENST00000397276 KDM3BQ7LBC6 1761 aa28.98■■■□□ 2.23
PABPN1-202ENST00000397276 NOL8Q76FK4 1167 aaKnown RBP28.97■■■□□ 2.23
PABPN1-202ENST00000397276 LMO7Q8WWI1 1683 aa28.97■■■□□ 2.23
PABPN1-202ENST00000397276 KIF1BPQ96EK5 621 aa28.97■■■□□ 2.23
PABPN1-202ENST00000397276 KSR2Q6VAB6 950 aa28.96■■■□□ 2.23
PABPN1-202ENST00000397276 PHRF1Q9P1Y6 1649 aaKnown RBP28.96■■■□□ 2.23
PABPN1-202ENST00000397276 NFATC2IPQ8NCF5 419 aa28.96■■■□□ 2.23
PABPN1-202ENST00000397276 PA2G4Q9UQ80 394 aaKnown RBP28.96■■■□□ 2.23
PABPN1-202ENST00000397276 TMEM94Q12767 1356 aa28.95■■■□□ 2.23
PABPN1-202ENST00000397276 MYL6BP14649 208 aa28.95■■■□□ 2.22
PABPN1-202ENST00000397276 ESPNB1AK53 854 aa28.94■■■□□ 2.22
PABPN1-202ENST00000397276 NCAPD2Q15021 1401 aa28.93■■■□□ 2.22
PABPN1-202ENST00000397276 PI4K2BQ8TCG2 481 aa28.93■■■□□ 2.22
PABPN1-202ENST00000397276 ZNF790Q6PG37 636 aa28.92■■■□□ 2.22
PABPN1-202ENST00000397276 AK9Q5TCS8 1911 aa28.92■■■□□ 2.22
PABPN1-202ENST00000397276 BAG4O95429 457 aaKnown RBP28.92■■■□□ 2.22
PABPN1-202ENST00000397276 MCCP23508 829 aa28.92■■■□□ 2.22
PABPN1-202ENST00000397276 RGPD5Q99666 1765 aa28.91■■■□□ 2.22
PABPN1-202ENST00000397276 TATP17735 454 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-202ENST00000397276 TRPM3Q9HCF6 1732 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-202ENST00000397276 PIP4K2AP48426 406 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-202ENST00000397276 HYPKQ9NX55 129 aa28.91■■■□□ 2.22
PABPN1-202ENST00000397276 UPF3BQ9BZI7 483 aaKnown RBP28.9■■■□□ 2.22
PABPN1-202ENST00000397276 HEG1Q9ULI3 1381 aa28.9■■■□□ 2.22
PABPN1-202ENST00000397276 NPHP3Q7Z494 1330 aa28.89■■■□□ 2.22
PABPN1-202ENST00000397276 FOXD4L5Q5VV16 416 aaPredicted RBP28.89■■■□□ 2.22
PABPN1-202ENST00000397276 MCTP1Q6DN14 999 aa28.89■■■□□ 2.22
PABPN1-202ENST00000397276 FOXD4L4Q8WXT5 416 aaPredicted RBP28.89■■■□□ 2.22
PABPN1-202ENST00000397276 SLC52A2Q9HAB3 445 aa28.89■■■□□ 2.22
PABPN1-202ENST00000397276 PHKG2P15735 406 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 PDIA6Q15084 440 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 RIC3Q7Z5B4 369 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 DDX21Q9NR30 783 aaKnown RBP eCLIP28.88■■■□□ 2.21
PABPN1-202ENST00000397276 AOX1Q06278 1338 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 GOLGA6L22H0YM25 854 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 ALDH1L1O75891 902 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 NUCB2P80303 420 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 TMX3Q96JJ7 454 aa28.88■■■□□ 2.21
PABPN1-202ENST00000397276 N4BP2Q86UW6 1770 aaPredicted RBP28.87■■■□□ 2.21
PABPN1-202ENST00000397276 HSP90AB4PQ58FF6 505 aa28.87■■■□□ 2.21
PABPN1-202ENST00000397276 HSPA2P54652 639 aa28.87■■■□□ 2.21
PABPN1-202ENST00000397276 SUCLG2Q96I99 432 aa28.86■■■□□ 2.21
PABPN1-202ENST00000397276 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
PABPN1-202ENST00000397276 MST1RQ04912 1400 aa28.86■■■□□ 2.21
PABPN1-202ENST00000397276 DDX58O95786 925 aaKnown RBP28.86■■■□□ 2.21
PABPN1-202ENST00000397276 CWC27Q6UX04 472 aaKnown RBP28.85■■■□□ 2.21
PABPN1-202ENST00000397276 CLASRPQ8N2M8 674 aaKnown RBP28.85■■■□□ 2.21
PABPN1-202ENST00000397276 ZNF496Q96IT1 587 aaPredicted RBP28.85■■■□□ 2.21
PABPN1-202ENST00000397276 GRM8O00222 908 aa28.85■■■□□ 2.21
PABPN1-202ENST00000397276 LINS1Q8NG48 757 aa28.85■■■□□ 2.21
PABPN1-202ENST00000397276 CHAMP1Q96JM3 812 aa28.85■■■□□ 2.21
PABPN1-202ENST00000397276 CWC22Q9HCG8 908 aaKnown RBP28.85■■■□□ 2.21
PABPN1-202ENST00000397276 HSP90AA2PQ14568 343 aaPredicted RBP28.84■■■□□ 2.21
PABPN1-202ENST00000397276 CNTROBQ8N137 903 aa28.84■■■□□ 2.21
PABPN1-202ENST00000397276 BICC1Q9H694 974 aaKnown RBP28.84■■■□□ 2.21
PABPN1-202ENST00000397276 SKOR2Q2VWA4 1001 aaPredicted RBP28.84■■■□□ 2.21
PABPN1-202ENST00000397276 DDX49Q9Y6V7 483 aaKnown RBP28.84■■■□□ 2.21
PABPN1-202ENST00000397276 OVOS2A0A0G2JMS6 1433 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 KDM6AO15550 1401 aaPredicted RBP28.83■■■□□ 2.21
PABPN1-202ENST00000397276 IFNL2Q8IZJ0 200 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
PABPN1-202ENST00000397276 KAZALD1Q96I82 304 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 MTX1Q13505 466 aa28.83■■■□□ 2.21
PABPN1-202ENST00000397276 COPS6Q7L5N1 327 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms