RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RGPD3A6NKT7 1758 aaPredicted RBP18.93■□□□□ 0.62
TM9SF1-202ENST00000396854 RGPD4Q7Z3J3 1758 aa18.93■□□□□ 0.62
TM9SF1-202ENST00000396854 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
TM9SF1-202ENST00000396854 BCL2L13Q9BXK5 485 aa18.93■□□□□ 0.62
TM9SF1-202ENST00000396854 TAF1LQ8IZX4 1826 aa18.92■□□□□ 0.62
TM9SF1-202ENST00000396854 RREB1Q92766 1687 aa18.92■□□□□ 0.62
TM9SF1-202ENST00000396854 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
TM9SF1-202ENST00000396854 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
TM9SF1-202ENST00000396854 TEX13AQ9BXU3 409 aaPredicted RBP18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 USP16Q9Y5T5 823 aa18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 KIF16BQ96L93 1317 aa18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 TRIM37O94972 964 aa18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 SIK1P57059 783 aa18.91■□□□□ 0.62
TM9SF1-202ENST00000396854 STK31Q9BXU1 1019 aa18.9■□□□□ 0.62
TM9SF1-202ENST00000396854 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
TM9SF1-202ENST00000396854 TCERG1O14776 1098 aaKnown RBP18.89■□□□□ 0.61
TM9SF1-202ENST00000396854 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
TM9SF1-202ENST00000396854 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
TM9SF1-202ENST00000396854 ATP6V1AP38606 617 aa18.87■□□□□ 0.61
TM9SF1-202ENST00000396854 MYH14Q7Z406 1995 aaKnown RBP18.87■□□□□ 0.61
TM9SF1-202ENST00000396854 PDIA6Q15084 440 aa18.86■□□□□ 0.61
TM9SF1-202ENST00000396854 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
TM9SF1-202ENST00000396854 STARD3NLO95772 234 aa18.86■□□□□ 0.61
TM9SF1-202ENST00000396854 ANP32AP39687 249 aaKnown RBP18.86■□□□□ 0.61
TM9SF1-202ENST00000396854 CYP19A1P11511 503 aaPredicted RBP18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 ITPK1Q13572 414 aa18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 PTPRCP08575 1304 aa18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 ZKSCAN2Q63HK3 967 aa18.85■□□□□ 0.61
TM9SF1-202ENST00000396854 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
TM9SF1-202ENST00000396854 PLIN1O60240 522 aa18.84■□□□□ 0.61
TM9SF1-202ENST00000396854 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
TM9SF1-202ENST00000396854 FRAT1Q92837 279 aaPredicted RBP18.84■□□□□ 0.61
TM9SF1-202ENST00000396854 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
TM9SF1-202ENST00000396854 PROSER3Q2NL68 480 aa18.83■□□□□ 0.61
TM9SF1-202ENST00000396854 C4BP0C0L5 1744 aa18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 PLSCR1O15162 318 aa18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 FLIIQ13045 1269 aa18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 ATF7IPQ6VMQ6 1270 aa18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 G2E3Q7L622 706 aa18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 IPO9Q96P70 1041 aaKnown RBP18.83■□□□□ 0.6
TM9SF1-202ENST00000396854 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 ANXA1P04083 346 aa18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 A1BGP04217 495 aa18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 CCNL1Q9UK58 526 aaPredicted RBP18.82■□□□□ 0.6
TM9SF1-202ENST00000396854 TRIM27P14373 513 aa18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 MS4A1P11836 297 aa18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 PHAXQ9H814 394 aaKnown RBP18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
TM9SF1-202ENST00000396854 APBA3O96018 575 aa18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 LINC00116Q8NCU8 138 aa18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 ARFGEF2Q9Y6D5 1785 aa18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 MYL6BP14649 208 aa18.8■□□□□ 0.6
TM9SF1-202ENST00000396854 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
TM9SF1-202ENST00000396854 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
TM9SF1-202ENST00000396854 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
TM9SF1-202ENST00000396854 ZBTB1Q9Y2K1 713 aa18.79■□□□□ 0.6
TM9SF1-202ENST00000396854 PXDNLA1KZ92 1463 aa18.79■□□□□ 0.6
TM9SF1-202ENST00000396854 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 ABCC4O15439 1325 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 KCNQ4P56696 695 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 C20orf194Q5TEA3 1177 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 LRRC4BQ9NT99 713 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
TM9SF1-202ENST00000396854 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
TM9SF1-202ENST00000396854 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
TM9SF1-202ENST00000396854 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
TM9SF1-202ENST00000396854 HMGB2P26583 209 aaKnown RBP18.77■□□□□ 0.59
TM9SF1-202ENST00000396854 TXNRD1Q16881 649 aa18.77■□□□□ 0.59
TM9SF1-202ENST00000396854 PROM2Q8N271 834 aa18.77■□□□□ 0.59
TM9SF1-202ENST00000396854 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
TM9SF1-202ENST00000396854 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
TM9SF1-202ENST00000396854 ADCY9O60503 1353 aa18.76■□□□□ 0.59
TM9SF1-202ENST00000396854 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 RLBP1P12271 317 aa18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 DDX58O95786 925 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 PANK1Q8TE04 598 aa18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
TM9SF1-202ENST00000396854 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 248.6 ms