RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SYCE3A1L190 88 aa16.2■□□□□ 0.18
TRIM40-207ENST00000396581 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
TRIM40-207ENST00000396581 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
TRIM40-207ENST00000396581 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
TRIM40-207ENST00000396581 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
TRIM40-207ENST00000396581 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
TRIM40-207ENST00000396581 STAP2Q9UGK3 403 aa16.19■□□□□ 0.18
TRIM40-207ENST00000396581 APBB1O00213 710 aa16.18■□□□□ 0.18
TRIM40-207ENST00000396581 LTN1O94822 1766 aa16.18■□□□□ 0.18
TRIM40-207ENST00000396581 GNAI2P04899 355 aa16.18■□□□□ 0.18
TRIM40-207ENST00000396581 MCCP23508 829 aa16.18■□□□□ 0.18
TRIM40-207ENST00000396581 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
TRIM40-207ENST00000396581 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
TRIM40-207ENST00000396581 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 ZMYND15Q9H091 742 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
TRIM40-207ENST00000396581 CHMLP26374 656 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 G2E3Q7L622 706 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 AOX1Q06278 1338 aa16.17■□□□□ 0.18
TRIM40-207ENST00000396581 MX1P20591 662 aa16.16■□□□□ 0.18
TRIM40-207ENST00000396581 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
TRIM40-207ENST00000396581 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
TRIM40-207ENST00000396581 PXDNQ92626 1479 aa16.16■□□□□ 0.18
TRIM40-207ENST00000396581 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
TRIM40-207ENST00000396581 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
TRIM40-207ENST00000396581 LTV1Q96GA3 475 aaPredicted RBP16.15■□□□□ 0.18
TRIM40-207ENST00000396581 SRCIN1Q9C0H9 1055 aa16.15■□□□□ 0.18
TRIM40-207ENST00000396581 R3HCC1Q9Y3T6 440 aaKnown RBP16.15■□□□□ 0.18
TRIM40-207ENST00000396581 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
TRIM40-207ENST00000396581 ATP8B2P98198 1209 aa16.15■□□□□ 0.18
TRIM40-207ENST00000396581 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
TRIM40-207ENST00000396581 F6X3S4 739 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 GNAI3P08754 354 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 TMEM87AQ8NBN3 555 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.17
TRIM40-207ENST00000396581 NBPF6Q5VWK0 638 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 KLHL34Q8N239 644 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 NBPF4Q96M43 638 aa16.14■□□□□ 0.17
TRIM40-207ENST00000396581 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
TRIM40-207ENST00000396581 PKNOX2Q96KN3 472 aa16.13■□□□□ 0.17
TRIM40-207ENST00000396581 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
TRIM40-207ENST00000396581 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
TRIM40-207ENST00000396581 DYNC1I1O14576 645 aa16.12■□□□□ 0.17
TRIM40-207ENST00000396581 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
TRIM40-207ENST00000396581 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
TRIM40-207ENST00000396581 PHF14O94880 888 aa16.12■□□□□ 0.17
TRIM40-207ENST00000396581 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
TRIM40-207ENST00000396581 SLC4A10Q6U841 1118 aa16.12■□□□□ 0.17
TRIM40-207ENST00000396581 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
TRIM40-207ENST00000396581 UQCRHLA0A096LP55 91 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 PNMA6EA0A0J9YXQ4 647 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 UQCRHP07919 91 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 HSPA4P34932 840 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
TRIM40-207ENST00000396581 WDR33Q9C0J8 1336 aaKnown RBP16.11■□□□□ 0.17
TRIM40-207ENST00000396581 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 FLIIQ13045 1269 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
TRIM40-207ENST00000396581 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
TRIM40-207ENST00000396581 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
TRIM40-207ENST00000396581 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
TRIM40-207ENST00000396581 RPAP1Q9BWH6 1393 aaPredicted RBP16.1■□□□□ 0.17
TRIM40-207ENST00000396581 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
TRIM40-207ENST00000396581 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
TRIM40-207ENST00000396581 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 USHBP1Q8N6Y0 703 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 RNF214Q8ND24 703 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 ANKRD24Q8TF21 1146 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
TRIM40-207ENST00000396581 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
TRIM40-207ENST00000396581 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
TRIM40-207ENST00000396581 ERBB3P21860 1342 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 GADD45BO75293 160 aaPredicted RBP16.07■□□□□ 0.16
TRIM40-207ENST00000396581 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
TRIM40-207ENST00000396581 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 TTC14Q96N46 770 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 IL25Q9H293 177 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
TRIM40-207ENST00000396581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRIM40-207ENST00000396581 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
TRIM40-207ENST00000396581 CPDO75976 1380 aa16.06■□□□□ 0.16
TRIM40-207ENST00000396581 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms