RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
TRIM39-203ENST00000396547 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
TRIM39-203ENST00000396547 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
TRIM39-203ENST00000396547 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
TRIM39-203ENST00000396547 MCCP23508 829 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 NME9Q86XW9 330 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 BRD1O95696 1058 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 PDE1AP54750 535 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
TRIM39-203ENST00000396547 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
TRIM39-203ENST00000396547 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
TRIM39-203ENST00000396547 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
TRIM39-203ENST00000396547 PUS7Q96PZ0 661 aaKnown RBP11.88□□□□□ -0.51
TRIM39-203ENST00000396547 KIF3AQ9Y496 699 aa11.88□□□□□ -0.51
TRIM39-203ENST00000396547 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
TRIM39-203ENST00000396547 DDX54Q8TDD1 881 aaKnown RBP11.88□□□□□ -0.51
TRIM39-203ENST00000396547 ATP7BP35670 1465 aa11.88□□□□□ -0.51
TRIM39-203ENST00000396547 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
TRIM39-203ENST00000396547 PHF14O94880 888 aa11.87□□□□□ -0.51
TRIM39-203ENST00000396547 ATF3P18847 181 aa11.87□□□□□ -0.51
TRIM39-203ENST00000396547 IL1RAPL2Q9NP60 686 aa11.87□□□□□ -0.51
TRIM39-203ENST00000396547 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
TRIM39-203ENST00000396547 G2E3Q7L622 706 aa11.87□□□□□ -0.51
TRIM39-203ENST00000396547 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
TRIM39-203ENST00000396547 JCADQ9P266 1359 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 HMMRO75330 724 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
TRIM39-203ENST00000396547 CPA1P15085 419 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 BRINP3Q76B58 766 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 PIBF1Q8WXW3 757 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
TRIM39-203ENST00000396547 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRIM39-203ENST00000396547 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
TRIM39-203ENST00000396547 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 MON2Q7Z3U7 1717 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 HMGN5P82970 282 aaKnown RBP11.85□□□□□ -0.51
TRIM39-203ENST00000396547 CHAF1AQ13111 956 aaPredicted RBP11.85□□□□□ -0.51
TRIM39-203ENST00000396547 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
TRIM39-203ENST00000396547 HSPA1LP34931 641 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 IL13P35225 146 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 PYCARDQ9ULZ3 195 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 DMTNQ08495 405 aa11.84□□□□□ -0.51
TRIM39-203ENST00000396547 RIOK3O14730 519 aaKnown RBP11.83□□□□□ -0.51
TRIM39-203ENST00000396547 CAMK4Q16566 473 aa11.83□□□□□ -0.51
TRIM39-203ENST00000396547 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
TRIM39-203ENST00000396547 CCDC183Q5T5S1 534 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
TRIM39-203ENST00000396547 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 VPS37CA5D8V6 355 aaPredicted RBP11.83□□□□□ -0.52
TRIM39-203ENST00000396547 MX1P20591 662 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 CHMLP26374 656 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 MCM2P49736 904 aa11.83□□□□□ -0.52
TRIM39-203ENST00000396547 IL25Q9H293 177 aa11.82□□□□□ -0.52
TRIM39-203ENST00000396547 KDM4AO75164 1064 aa11.82□□□□□ -0.52
TRIM39-203ENST00000396547 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
TRIM39-203ENST00000396547 ZNF592Q92610 1267 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 COG3Q96JB2 828 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 PNPLA6Q8IY17 1366 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 PNMA6EA0A0J9YXQ4 647 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 CUL4AQ13619 759 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
TRIM39-203ENST00000396547 FERMT3Q86UX7 667 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 SMC3Q9UQE7 1217 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 ABCC6O95255 1503 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 AP5Z1O43299 807 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 FOXO3O43524 673 aa11.81□□□□□ -0.52
TRIM39-203ENST00000396547 DNM1Q05193 864 aaKnown RBP11.81□□□□□ -0.52
TRIM39-203ENST00000396547 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
TRIM39-203ENST00000396547 GNAI2P04899 355 aa11.8□□□□□ -0.52
TRIM39-203ENST00000396547 NAA30Q147X3 362 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-203ENST00000396547 FAM184AQ8NB25 1140 aa11.8□□□□□ -0.52
TRIM39-203ENST00000396547 C16orf45Q96MC5 204 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-203ENST00000396547 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
TRIM39-203ENST00000396547 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
TRIM39-203ENST00000396547 FAM173BQ6P4H8 233 aa11.8□□□□□ -0.52
TRIM39-203ENST00000396547 CCDC83Q8IWF9 413 aa11.8□□□□□ -0.52
TRIM39-203ENST00000396547 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
TRIM39-203ENST00000396547 SYT1P21579 422 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 PTGS1P23219 599 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 CKAP2LQ8IYA6 745 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 STX6O43752 255 aa11.79□□□□□ -0.52
TRIM39-203ENST00000396547 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms