RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TJP1Q07157 1748 aa19.26■□□□□ 0.67
VCPKMT-201ENST00000395859 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
VCPKMT-201ENST00000395859 VEGFBP49765 207 aa19.26■□□□□ 0.67
VCPKMT-201ENST00000395859 LBX1P52954 281 aa19.26■□□□□ 0.67
VCPKMT-201ENST00000395859 HSPA8P11142 646 aaKnown RBP19.24■□□□□ 0.67
VCPKMT-201ENST00000395859 INTS5Q6P9B9 1019 aaKnown RBP19.23■□□□□ 0.67
VCPKMT-201ENST00000395859 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
VCPKMT-201ENST00000395859 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 ST20-MTHFSA0A0A6YYL1 179 aa19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 DPY19L2Q6NUT2 758 aa19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 AIDAQ96BJ3 306 aa19.22■□□□□ 0.67
VCPKMT-201ENST00000395859 ITGBL1O95965 494 aaPredicted RBP19.2■□□□□ 0.66
VCPKMT-201ENST00000395859 NFIXQ14938 502 aa19.2■□□□□ 0.66
VCPKMT-201ENST00000395859 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
VCPKMT-201ENST00000395859 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
VCPKMT-201ENST00000395859 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
VCPKMT-201ENST00000395859 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
VCPKMT-201ENST00000395859 RASSF10A6NK89 507 aa19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 PTCD1O75127 700 aaKnown RBP19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
VCPKMT-201ENST00000395859 ADAMTSL1Q8N6G6 1762 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 DDNO94850 711 aaPredicted RBP19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 ERFEQ4G0M1 354 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 LDHDQ86WU2 507 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 C2CD5Q86YS7 1000 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 SCN4AP35499 1836 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 PDE4DIPQ5VU43 2346 aa19.16■□□□□ 0.66
VCPKMT-201ENST00000395859 THSD7BQ9C0I4 1608 aa19.15■□□□□ 0.66
VCPKMT-201ENST00000395859 L3MBTL3Q96JM7 780 aaPredicted RBP19.15■□□□□ 0.66
VCPKMT-201ENST00000395859 NARFQ9UHQ1 456 aa19.15■□□□□ 0.66
VCPKMT-201ENST00000395859 ANKRD31Q8N7Z5 1873 aa19.15■□□□□ 0.66
VCPKMT-201ENST00000395859 SERPINB2P05120 415 aa19.14■□□□□ 0.65
VCPKMT-201ENST00000395859 CABP4P57796 275 aa19.14■□□□□ 0.65
VCPKMT-201ENST00000395859 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.65
VCPKMT-201ENST00000395859 POLKQ9UBT6 870 aa19.14■□□□□ 0.65
VCPKMT-201ENST00000395859 ZPR1O75312 459 aa19.13■□□□□ 0.65
VCPKMT-201ENST00000395859 TAF1DQ9H5J8 278 aaPredicted RBP19.13■□□□□ 0.65
VCPKMT-201ENST00000395859 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
VCPKMT-201ENST00000395859 H0YIN7 160 aa19.12■□□□□ 0.65
VCPKMT-201ENST00000395859 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
VCPKMT-201ENST00000395859 NFATC2IPQ8NCF5 419 aa19.11■□□□□ 0.65
VCPKMT-201ENST00000395859 CCDC85CA6NKD9 419 aa19.1■□□□□ 0.65
VCPKMT-201ENST00000395859 C21orf2O43822 256 aa19.1■□□□□ 0.65
VCPKMT-201ENST00000395859 MAP2K1Q02750 393 aaPredicted RBP19.1■□□□□ 0.65
VCPKMT-201ENST00000395859 COL15A1P39059 1388 aa19.09■□□□□ 0.65
VCPKMT-201ENST00000395859 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
VCPKMT-201ENST00000395859 IQCA1LA6NCM1 817 aa19.09■□□□□ 0.65
VCPKMT-201ENST00000395859 DEFB115Q30KQ5 88 aa19.09■□□□□ 0.65
VCPKMT-201ENST00000395859 DNAJC10Q8IXB1 793 aa19.09■□□□□ 0.65
VCPKMT-201ENST00000395859 CYP19A1P11511 503 aaPredicted RBP19.08■□□□□ 0.64
VCPKMT-201ENST00000395859 ZNF530Q6P9A1 599 aaPredicted RBP19.08■□□□□ 0.64
VCPKMT-201ENST00000395859 TAOK3Q9H2K8 898 aa19.08■□□□□ 0.64
VCPKMT-201ENST00000395859 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
VCPKMT-201ENST00000395859 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
VCPKMT-201ENST00000395859 SCN11AQ9UI33 1791 aa19.06■□□□□ 0.64
VCPKMT-201ENST00000395859 MTHFSP49914 203 aa19.06■□□□□ 0.64
VCPKMT-201ENST00000395859 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
VCPKMT-201ENST00000395859 SLX4Q8IY92 1834 aa19.06■□□□□ 0.64
VCPKMT-201ENST00000395859 BRIP1Q9BX63 1249 aa19.05■□□□□ 0.64
VCPKMT-201ENST00000395859 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
VCPKMT-201ENST00000395859 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
VCPKMT-201ENST00000395859 LTBP1Q14766 1721 aa19.03■□□□□ 0.64
VCPKMT-201ENST00000395859 ZNF622Q969S3 477 aaKnown RBP eCLIP19.03■□□□□ 0.64
VCPKMT-201ENST00000395859 CNTROBQ8N137 903 aa19.02■□□□□ 0.64
VCPKMT-201ENST00000395859 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
VCPKMT-201ENST00000395859 PDE6BP35913 854 aa19.01■□□□□ 0.63
VCPKMT-201ENST00000395859 PRR5LQ6MZQ0 368 aa19.01■□□□□ 0.63
VCPKMT-201ENST00000395859 C7orf43Q8WVR3 580 aa19.01■□□□□ 0.63
VCPKMT-201ENST00000395859 MRC1P22897 1456 aa19.01■□□□□ 0.63
VCPKMT-201ENST00000395859 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
VCPKMT-201ENST00000395859 HACL1Q9UJ83 578 aa19■□□□□ 0.63
VCPKMT-201ENST00000395859 EPHX2P34913 555 aa18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 TBC1D9BQ66K14 1250 aa18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 PRPF40BQ6NWY9 871 aaKnown RBP18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
VCPKMT-201ENST00000395859 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
VCPKMT-201ENST00000395859 EAPPQ56P03 285 aaPredicted RBP18.98■□□□□ 0.63
VCPKMT-201ENST00000395859 STYK1Q6J9G0 422 aa18.98■□□□□ 0.63
VCPKMT-201ENST00000395859 MCOLN1Q9GZU1 580 aa18.98■□□□□ 0.63
VCPKMT-201ENST00000395859 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 SRGNP10124 158 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 PNMA8AQ86V59 439 aaPredicted RBP18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 CNKSR1Q969H4 720 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 CAPNS2Q96L46 248 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 SLC52A2Q9HAB3 445 aa18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
VCPKMT-201ENST00000395859 CDCA8Q53HL2 280 aa18.96■□□□□ 0.63
VCPKMT-201ENST00000395859 BICDL1Q6ZP65 573 aa18.96■□□□□ 0.63
VCPKMT-201ENST00000395859 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
VCPKMT-201ENST00000395859 CCDC24Q8N4L8 307 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms