RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
SCAF11-204ENST00000395454 APBA3O96018 575 aa19.21■□□□□ 0.67
SCAF11-204ENST00000395454 EIF4A1P60842 406 aaKnown RBP19.21■□□□□ 0.67
SCAF11-204ENST00000395454 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
SCAF11-204ENST00000395454 C8orf58Q8NAV2 365 aa19.21■□□□□ 0.67
SCAF11-204ENST00000395454 FMNL2Q96PY5 1086 aa19.21■□□□□ 0.67
SCAF11-204ENST00000395454 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
SCAF11-204ENST00000395454 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
SCAF11-204ENST00000395454 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
SCAF11-204ENST00000395454 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
SCAF11-204ENST00000395454 TNS1Q9HBL0 1735 aaKnown RBP19.19■□□□□ 0.66
SCAF11-204ENST00000395454 SF3B2Q13435 895 aaKnown RBP19.19■□□□□ 0.66
SCAF11-204ENST00000395454 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
SCAF11-204ENST00000395454 KCPQ6ZWJ8 1503 aa19.19■□□□□ 0.66
SCAF11-204ENST00000395454 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
SCAF11-204ENST00000395454 SIK1P57059 783 aa19.17■□□□□ 0.66
SCAF11-204ENST00000395454 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
SCAF11-204ENST00000395454 PRAMEF22A3QJZ6 481 aa19.16■□□□□ 0.66
SCAF11-204ENST00000395454 IGHDP01880 384 aa19.16■□□□□ 0.66
SCAF11-204ENST00000395454 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
SCAF11-204ENST00000395454 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
SCAF11-204ENST00000395454 ABCC4O15439 1325 aa19.16■□□□□ 0.66
SCAF11-204ENST00000395454 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
SCAF11-204ENST00000395454 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
SCAF11-204ENST00000395454 SNRPA1P09661 255 aaKnown RBP19.15■□□□□ 0.66
SCAF11-204ENST00000395454 KCNQ4P56696 695 aa19.15■□□□□ 0.66
SCAF11-204ENST00000395454 SLC4A9Q96Q91 983 aa19.15■□□□□ 0.66
SCAF11-204ENST00000395454 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
SCAF11-204ENST00000395454 PLSCR1O15162 318 aa19.14■□□□□ 0.65
SCAF11-204ENST00000395454 LY75O60449 1722 aa19.14■□□□□ 0.65
SCAF11-204ENST00000395454 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
SCAF11-204ENST00000395454 TMEM57Q8N5G2 664 aa19.14■□□□□ 0.65
SCAF11-204ENST00000395454 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
SCAF11-204ENST00000395454 CCDC125Q86Z20 511 aa19.13■□□□□ 0.65
SCAF11-204ENST00000395454 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
SCAF11-204ENST00000395454 C5P01031 1676 aa19.12■□□□□ 0.65
SCAF11-204ENST00000395454 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
SCAF11-204ENST00000395454 BAG6P46379 1132 aa19.12■□□□□ 0.65
SCAF11-204ENST00000395454 EN1Q05925 392 aaPredicted RBP19.12■□□□□ 0.65
SCAF11-204ENST00000395454 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
SCAF11-204ENST00000395454 NECTIN2Q92692 538 aa19.12■□□□□ 0.65
SCAF11-204ENST00000395454 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
SCAF11-204ENST00000395454 HOXB7P09629 217 aa19.11■□□□□ 0.65
SCAF11-204ENST00000395454 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
SCAF11-204ENST00000395454 TXNRD1Q16881 649 aa19.11■□□□□ 0.65
SCAF11-204ENST00000395454 DEFB132Q7Z7B7 95 aa19.11■□□□□ 0.65
SCAF11-204ENST00000395454 API5Q9BZZ5 524 aaKnown RBP19.11■□□□□ 0.65
SCAF11-204ENST00000395454 ITPK1Q13572 414 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 ITPRIPQ8IWB1 547 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 UPF1Q92900 1129 aaKnown RBP eCLIP19.1■□□□□ 0.65
SCAF11-204ENST00000395454 SLC27A3Q5K4L6 730 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 PROM2Q8N271 834 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
SCAF11-204ENST00000395454 CHMP4BQ9H444 224 aaKnown RBP19.1■□□□□ 0.65
SCAF11-204ENST00000395454 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
SCAF11-204ENST00000395454 TJP1Q07157 1748 aa19.09■□□□□ 0.65
SCAF11-204ENST00000395454 STARD3NLO95772 234 aa19.09■□□□□ 0.65
SCAF11-204ENST00000395454 EZH2Q15910 746 aaKnown RBP19.09■□□□□ 0.65
SCAF11-204ENST00000395454 BACH2Q9BYV9 841 aa19.09■□□□□ 0.65
SCAF11-204ENST00000395454 RWDD1Q9H446 243 aaPredicted RBP19.09■□□□□ 0.65
SCAF11-204ENST00000395454 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
SCAF11-204ENST00000395454 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.65
SCAF11-204ENST00000395454 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.65
SCAF11-204ENST00000395454 PTPRCP08575 1304 aa19.08■□□□□ 0.65
SCAF11-204ENST00000395454 LAMB4A4D0S4 1761 aa19.08■□□□□ 0.64
SCAF11-204ENST00000395454 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.64
SCAF11-204ENST00000395454 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
SCAF11-204ENST00000395454 PDE4AP27815 886 aa19.07■□□□□ 0.64
SCAF11-204ENST00000395454 SKAP1Q86WV1 359 aa19.07■□□□□ 0.64
SCAF11-204ENST00000395454 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
SCAF11-204ENST00000395454 ZBTB7BO15156 539 aaPredicted RBP19.06■□□□□ 0.64
SCAF11-204ENST00000395454 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
SCAF11-204ENST00000395454 TAF1LQ8IZX4 1826 aa19.06■□□□□ 0.64
SCAF11-204ENST00000395454 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
SCAF11-204ENST00000395454 CICQ96RK0 1608 aaPredicted RBP19.05■□□□□ 0.64
SCAF11-204ENST00000395454 A1BGP04217 495 aa19.05■□□□□ 0.64
SCAF11-204ENST00000395454 PIP4K2AP48426 406 aaPredicted RBP19.05■□□□□ 0.64
SCAF11-204ENST00000395454 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
SCAF11-204ENST00000395454 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
SCAF11-204ENST00000395454 COL5A3P25940 1745 aaPredicted RBP19.05■□□□□ 0.64
SCAF11-204ENST00000395454 CRKLP46109 303 aaKnown RBP19.04■□□□□ 0.64
SCAF11-204ENST00000395454 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
SCAF11-204ENST00000395454 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
SCAF11-204ENST00000395454 ANXA1P04083 346 aa19.03■□□□□ 0.64
SCAF11-204ENST00000395454 MYL6BP14649 208 aa19.03■□□□□ 0.64
SCAF11-204ENST00000395454 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
SCAF11-204ENST00000395454 ZBTB1Q9Y2K1 713 aa19.03■□□□□ 0.64
SCAF11-204ENST00000395454 MYH14Q7Z406 1995 aaKnown RBP19.03■□□□□ 0.64
SCAF11-204ENST00000395454 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.64
SCAF11-204ENST00000395454 ZNF330Q9Y3S2 320 aaPredicted RBP19.02■□□□□ 0.64
SCAF11-204ENST00000395454 PROSER3Q2NL68 480 aa19.02■□□□□ 0.63
SCAF11-204ENST00000395454 CCDC87Q9NVE4 849 aa19.02■□□□□ 0.63
SCAF11-204ENST00000395454 C4BP0C0L5 1744 aa19.01■□□□□ 0.63
SCAF11-204ENST00000395454 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
SCAF11-204ENST00000395454 HMGB2P26583 209 aaKnown RBP19.01■□□□□ 0.63
SCAF11-204ENST00000395454 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
SCAF11-204ENST00000395454 AK7Q96M32 723 aa19.01■□□□□ 0.63
SCAF11-204ENST00000395454 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
SCAF11-204ENST00000395454 NBPF26B4DH59 902 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms