RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
HLA-DRA-202ENST00000395388 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
HLA-DRA-202ENST00000395388 AK7Q96M32 723 aa16.17■□□□□ 0.18
HLA-DRA-202ENST00000395388 ZNF831Q5JPB2 1677 aa16.16■□□□□ 0.18
HLA-DRA-202ENST00000395388 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
HLA-DRA-202ENST00000395388 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
HLA-DRA-202ENST00000395388 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
HLA-DRA-202ENST00000395388 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
HLA-DRA-202ENST00000395388 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
HLA-DRA-202ENST00000395388 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
HLA-DRA-202ENST00000395388 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
HLA-DRA-202ENST00000395388 EP400Q96L91 3159 aa16.15■□□□□ 0.18
HLA-DRA-202ENST00000395388 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 TFCP2L1Q9NZI6 479 aa16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
HLA-DRA-202ENST00000395388 VAMP4O75379 141 aa16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 A1BGP04217 495 aa16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 SLC15A2Q16348 729 aa16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
HLA-DRA-202ENST00000395388 GNPATO15228 680 aa16.12■□□□□ 0.17
HLA-DRA-202ENST00000395388 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
HLA-DRA-202ENST00000395388 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
HLA-DRA-202ENST00000395388 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
HLA-DRA-202ENST00000395388 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
HLA-DRA-202ENST00000395388 C5P01031 1676 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 TJP1Q07157 1748 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 TAF1LQ8IZX4 1826 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 IL6STP40189 918 aaPredicted RBP16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 TRAPPC3LQ5T215 181 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 ARXQ96QS3 562 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 RREB1Q92766 1687 aa16.11■□□□□ 0.17
HLA-DRA-202ENST00000395388 CICQ96RK0 1608 aaPredicted RBP16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 A0A087WZG4 1122 aa16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 MYL6BP14649 208 aa16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 ZBTB1Q9Y2K1 713 aa16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
HLA-DRA-202ENST00000395388 HYPKQ9NX55 129 aa16.09■□□□□ 0.17
HLA-DRA-202ENST00000395388 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
HLA-DRA-202ENST00000395388 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
HLA-DRA-202ENST00000395388 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
HLA-DRA-202ENST00000395388 PHF14O94880 888 aa16.08■□□□□ 0.16
HLA-DRA-202ENST00000395388 SSFA2P28290 1259 aa16.08■□□□□ 0.16
HLA-DRA-202ENST00000395388 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
HLA-DRA-202ENST00000395388 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
HLA-DRA-202ENST00000395388 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 RFC4P35249 363 aa16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 NBPF15Q8N660 670 aa16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
HLA-DRA-202ENST00000395388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
HLA-DRA-202ENST00000395388 ZPR1O75312 459 aa16.06■□□□□ 0.16
HLA-DRA-202ENST00000395388 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
HLA-DRA-202ENST00000395388 ANXA1P04083 346 aa16.05■□□□□ 0.16
HLA-DRA-202ENST00000395388 PDIA6Q15084 440 aa16.05■□□□□ 0.16
HLA-DRA-202ENST00000395388 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
HLA-DRA-202ENST00000395388 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
HLA-DRA-202ENST00000395388 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
HLA-DRA-202ENST00000395388 COL15A1P39059 1388 aa16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
HLA-DRA-202ENST00000395388 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
HLA-DRA-202ENST00000395388 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
HLA-DRA-202ENST00000395388 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.16
HLA-DRA-202ENST00000395388 RARSP54136 660 aaKnown RBP16.02■□□□□ 0.16
HLA-DRA-202ENST00000395388 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
HLA-DRA-202ENST00000395388 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 ANKRD13DQ6ZTN6 518 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 MRPL50Q8N5N7 158 aaKnown RBP16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 SLC16A10Q8TF71 515 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
HLA-DRA-202ENST00000395388 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 FLIIQ13045 1269 aa16■□□□□ 0.15
HLA-DRA-202ENST00000395388 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms