RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
HIF1A-203ENST00000394997 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
HIF1A-203ENST00000394997 SOX12O15370 315 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 AMPHP49418 695 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 MTX1Q13505 466 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 PROSER3Q2NL68 480 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 PI4K2BQ8TCG2 481 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 SLIT2O94813 1529 aa12.78□□□□□ -0.36
HIF1A-203ENST00000394997 SPEF2Q9C093 1822 aa12.77□□□□□ -0.36
HIF1A-203ENST00000394997 TCHHQ07283 1943 aa12.77□□□□□ -0.36
HIF1A-203ENST00000394997 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.36
HIF1A-203ENST00000394997 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.36
HIF1A-203ENST00000394997 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.36
HIF1A-203ENST00000394997 JCADQ9P266 1359 aa12.77□□□□□ -0.36
HIF1A-203ENST00000394997 RNMTO43148 476 aaKnown RBP12.77□□□□□ -0.37
HIF1A-203ENST00000394997 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
HIF1A-203ENST00000394997 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
HIF1A-203ENST00000394997 COL15A1P39059 1388 aa12.77□□□□□ -0.37
HIF1A-203ENST00000394997 PDE1AP54750 535 aa12.76□□□□□ -0.37
HIF1A-203ENST00000394997 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
HIF1A-203ENST00000394997 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
HIF1A-203ENST00000394997 LAMB2P55268 1798 aa12.76□□□□□ -0.37
HIF1A-203ENST00000394997 LRP5O75197 1615 aa12.75□□□□□ -0.37
HIF1A-203ENST00000394997 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
HIF1A-203ENST00000394997 MYH3P11055 1940 aa12.75□□□□□ -0.37
HIF1A-203ENST00000394997 RAB3GAP1Q15042 981 aa12.75□□□□□ -0.37
HIF1A-203ENST00000394997 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
HIF1A-203ENST00000394997 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
HIF1A-203ENST00000394997 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
HIF1A-203ENST00000394997 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
HIF1A-203ENST00000394997 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
HIF1A-203ENST00000394997 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
HIF1A-203ENST00000394997 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
HIF1A-203ENST00000394997 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 MYH7P12883 1935 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 AOX1Q06278 1338 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 CDC45O75419 566 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
HIF1A-203ENST00000394997 ECM29Q5VYK3 1845 aa12.73□□□□□ -0.37
HIF1A-203ENST00000394997 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 NUP98P52948 1817 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
HIF1A-203ENST00000394997 BCORQ6W2J9 1755 aa12.71□□□□□ -0.37
HIF1A-203ENST00000394997 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
HIF1A-203ENST00000394997 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
HIF1A-203ENST00000394997 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
HIF1A-203ENST00000394997 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
HIF1A-203ENST00000394997 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
HIF1A-203ENST00000394997 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
HIF1A-203ENST00000394997 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
HIF1A-203ENST00000394997 COL4A1P02462 1669 aa12.71□□□□□ -0.38
HIF1A-203ENST00000394997 CASP7P55210 303 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 GNAI2P04899 355 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 IGKV5-2P06315 115 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
HIF1A-203ENST00000394997 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
HIF1A-203ENST00000394997 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
HIF1A-203ENST00000394997 MCM4P33991 863 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
HIF1A-203ENST00000394997 CYP27B1O15528 508 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 EXOC6BQ9Y2D4 811 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 KCNB2Q92953 911 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 PHKG2P15735 406 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
HIF1A-203ENST00000394997 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
HIF1A-203ENST00000394997 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
HIF1A-203ENST00000394997 PKP1Q13835 747 aa12.68□□□□□ -0.38
HIF1A-203ENST00000394997 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
HIF1A-203ENST00000394997 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
HIF1A-203ENST00000394997 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
HIF1A-203ENST00000394997 CHMLP26374 656 aa12.67□□□□□ -0.38
HIF1A-203ENST00000394997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.385e-7■■□□□ 12.3
HIF1A-203ENST00000394997 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
HIF1A-203ENST00000394997 PSME1Q06323 249 aa12.67□□□□□ -0.38
HIF1A-203ENST00000394997 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
HIF1A-203ENST00000394997 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 K7ELQ4 463 aaPredicted RBP12.66□□□□□ -0.38
HIF1A-203ENST00000394997 ANXA1P04083 346 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
HIF1A-203ENST00000394997 CUL4AQ13619 759 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 CHMP5Q9NZZ3 219 aa12.65□□□□□ -0.38
HIF1A-203ENST00000394997 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
HIF1A-203ENST00000394997 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms