RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
APLF-202ENST00000394342 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
APLF-202ENST00000394342 BCORQ6W2J9 1755 aa11.3□□□□□ -0.6
APLF-202ENST00000394342 HEG1Q9ULI3 1381 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 PHF14O94880 888 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 POLD1P28340 1107 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
APLF-202ENST00000394342 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 NUP98P52948 1817 aa11.29□□□□□ -0.6
APLF-202ENST00000394342 SCN7AQ01118 1682 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
APLF-202ENST00000394342 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
APLF-202ENST00000394342 LMOD3Q0VAK6 560 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
APLF-202ENST00000394342 TRAPPC3LQ5T215 181 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 ARXQ96QS3 562 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
APLF-202ENST00000394342 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
APLF-202ENST00000394342 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
APLF-202ENST00000394342 RIPK4P57078 832 aa11.27□□□□□ -0.61
APLF-202ENST00000394342 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
APLF-202ENST00000394342 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
APLF-202ENST00000394342 ZNF496Q96IT1 587 aaPredicted RBP11.27□□□□□ -0.61
APLF-202ENST00000394342 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
APLF-202ENST00000394342 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
APLF-202ENST00000394342 STARD3NLO95772 234 aa11.26□□□□□ -0.61
APLF-202ENST00000394342 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
APLF-202ENST00000394342 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
APLF-202ENST00000394342 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
APLF-202ENST00000394342 KCNQ3O43525 872 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 ABCB7O75027 752 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 RFC4P35249 363 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
APLF-202ENST00000394342 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
APLF-202ENST00000394342 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
APLF-202ENST00000394342 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
APLF-202ENST00000394342 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
APLF-202ENST00000394342 COL15A1P39059 1388 aa11.24□□□□□ -0.61
APLF-202ENST00000394342 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
APLF-202ENST00000394342 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
APLF-202ENST00000394342 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
APLF-202ENST00000394342 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
APLF-202ENST00000394342 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
APLF-202ENST00000394342 A0A087WZG4 1122 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 GYS1P13807 737 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 ANKRD36CQ5JPF3 1778 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
APLF-202ENST00000394342 CACNA1SQ13698 1873 aa11.21□□□□□ -0.61
APLF-202ENST00000394342 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.61
APLF-202ENST00000394342 ZPR1O75312 459 aa11.21□□□□□ -0.61
APLF-202ENST00000394342 CANXP27824 592 aaKnown RBP11.21□□□□□ -0.61
APLF-202ENST00000394342 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.61
APLF-202ENST00000394342 EIF5P55010 431 aaKnown RBP11.21□□□□□ -0.61
APLF-202ENST00000394342 NARFQ9UHQ1 456 aa11.21□□□□□ -0.61
APLF-202ENST00000394342 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
APLF-202ENST00000394342 APAF1O14727 1248 aa11.2□□□□□ -0.62
APLF-202ENST00000394342 MMP10P09238 476 aa11.2□□□□□ -0.62
APLF-202ENST00000394342 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
APLF-202ENST00000394342 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
APLF-202ENST00000394342 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
APLF-202ENST00000394342 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
APLF-202ENST00000394342 CCDC88AQ3V6T2 1871 aa11.19□□□□□ -0.62
APLF-202ENST00000394342 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
APLF-202ENST00000394342 A1BGP04217 495 aa11.19□□□□□ -0.62
APLF-202ENST00000394342 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
APLF-202ENST00000394342 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
APLF-202ENST00000394342 CHL1O00533 1208 aa11.18□□□□□ -0.62
APLF-202ENST00000394342 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
APLF-202ENST00000394342 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
APLF-202ENST00000394342 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
APLF-202ENST00000394342 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
APLF-202ENST00000394342 C10orf71Q711Q0 1435 aa11.18□□□□□ -0.62
APLF-202ENST00000394342 ARFGEF2Q9Y6D5 1785 aa11.17□□□□□ -0.62
APLF-202ENST00000394342 SBF1O95248 1867 aa11.17□□□□□ -0.62
APLF-202ENST00000394342 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 TM4SF1P30408 202 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 CCDC27Q2M243 656 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
APLF-202ENST00000394342 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 NLGN2Q8NFZ4 835 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
APLF-202ENST00000394342 ZNF330Q9Y3S2 320 aaPredicted RBP11.16□□□□□ -0.62
APLF-202ENST00000394342 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms