RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.04
LCA5-202ENST00000392959 GSDMDP57764 484 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 UBE2HP62256 183 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 EVI5LQ96CN4 794 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
LCA5-202ENST00000392959 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.03
LCA5-202ENST00000392959 UVSSAQ2YD98 709 aa15.27■□□□□ 0.03
LCA5-202ENST00000392959 RBM27Q9P2N5 1060 aaKnown RBP15.27■□□□□ 0.03
LCA5-202ENST00000392959 IL16Q14005 1332 aa15.27■□□□□ 0.03
LCA5-202ENST00000392959 SPA17Q15506 151 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
LCA5-202ENST00000392959 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 ENOX2Q16206 610 aaKnown RBP15.26■□□□□ 0.03
LCA5-202ENST00000392959 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
LCA5-202ENST00000392959 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
LCA5-202ENST00000392959 CAVIN2O95810 425 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 AMOTQ4VCS5 1084 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
LCA5-202ENST00000392959 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 STARD3NLO95772 234 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
LCA5-202ENST00000392959 CASQ1P31415 396 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 NSD2O96028 1365 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 MINDY4BA8MYZ0 360 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 ZNF213O14771 459 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 CCT2P78371 535 aaKnown RBP15.25■□□□□ 0.03
LCA5-202ENST00000392959 NUCB1Q02818 461 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 ZRSR2Q15696 482 aaKnown RBP15.25■□□□□ 0.03
LCA5-202ENST00000392959 CNNM3Q8NE01 707 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
LCA5-202ENST00000392959 ZSCAN23Q3MJ62 389 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
LCA5-202ENST00000392959 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 DISP3Q9P2K9 1392 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 XRCC6P12956 609 aaKnown RBP eCLIP15.24■□□□□ 0.03
LCA5-202ENST00000392959 STX1AQ16623 288 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 ARHGAP45Q92619 1136 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 TMX3Q96JJ7 454 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 GOLGA8BA8MQT2 603 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
LCA5-202ENST00000392959 CLCN1P35523 988 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 FKBP15Q5T1M5 1219 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
LCA5-202ENST00000392959 DYNC1I1O14576 645 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
LCA5-202ENST00000392959 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 BIN1O00499 593 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 PRIMPOLQ96LW4 560 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 HYPKQ9NX55 129 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 USP5P45974 858 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 ANKRD18AQ8IVF6 992 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
LCA5-202ENST00000392959 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 WASLO00401 505 aaPredicted RBP15.22■□□□□ 0.03
LCA5-202ENST00000392959 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
LCA5-202ENST00000392959 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 CPLX3Q8WVH0 158 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 A0A087WZG4 1122 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 SDSP20132 328 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 SHTN1A0MZ66 631 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 MCM3P25205 808 aa15.22■□□□□ 0.03
LCA5-202ENST00000392959 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 IQCA1Q86XH1 822 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 POLR3GO15318 223 aaPredicted RBP15.21■□□□□ 0.03
LCA5-202ENST00000392959 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 IFIT3O14879 490 aaKnown RBP15.21■□□□□ 0.03
LCA5-202ENST00000392959 ZNF76P36508 570 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 ZSCAN29Q8IWY8 852 aaPredicted RBP15.21■□□□□ 0.03
LCA5-202ENST00000392959 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 CALCOCO1Q9P1Z2 691 aa15.21■□□□□ 0.03
LCA5-202ENST00000392959 PAFAH1B1P43034 410 aa15.21■□□□□ 0.02
LCA5-202ENST00000392959 USP16Q9Y5T5 823 aa15.21■□□□□ 0.02
LCA5-202ENST00000392959 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 PPP1R12BO60237 982 aaPredicted RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 SNW1Q13573 536 aaKnown RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 PPP4R3BQ5MIZ7 849 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 YEATS4O95619 227 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 IDI1Q13907 227 aa15.2■□□□□ 0.02
LCA5-202ENST00000392959 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
LCA5-202ENST00000392959 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 ABCA10Q8WWZ4 1543 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms