RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LRRC37A3O60309 1634 aa18.29■□□□□ 0.52
SHTN1-204ENST00000392903 KCNQ3O43525 872 aa18.29■□□□□ 0.52
SHTN1-204ENST00000392903 ADAMTSL3P82987 1691 aa18.29■□□□□ 0.52
SHTN1-204ENST00000392903 LRSAM1Q6UWE0 723 aa18.28■□□□□ 0.52
SHTN1-204ENST00000392903 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
SHTN1-204ENST00000392903 SDSP20132 328 aa18.27■□□□□ 0.52
SHTN1-204ENST00000392903 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
SHTN1-204ENST00000392903 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.51
SHTN1-204ENST00000392903 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.51
SHTN1-204ENST00000392903 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.51
SHTN1-204ENST00000392903 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
SHTN1-204ENST00000392903 TEFQ10587 303 aa18.25■□□□□ 0.51
SHTN1-204ENST00000392903 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
SHTN1-204ENST00000392903 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
SHTN1-204ENST00000392903 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
SHTN1-204ENST00000392903 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
SHTN1-204ENST00000392903 LRRFIP2Q9Y608 721 aaKnown RBP18.25■□□□□ 0.51
SHTN1-204ENST00000392903 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 ANXA1P04083 346 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 GNAI3P08754 354 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 PKP1Q13835 747 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 UTP14CQ5TAP6 766 aaKnown RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 ANKRD24Q8TF21 1146 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 CCDC94Q9BW85 323 aaPredicted RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 BTBD11A6QL63 1104 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
SHTN1-204ENST00000392903 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
SHTN1-204ENST00000392903 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
SHTN1-204ENST00000392903 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
SHTN1-204ENST00000392903 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
SHTN1-204ENST00000392903 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
SHTN1-204ENST00000392903 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
SHTN1-204ENST00000392903 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
SHTN1-204ENST00000392903 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
SHTN1-204ENST00000392903 PDE1AP54750 535 aa18.21■□□□□ 0.51
SHTN1-204ENST00000392903 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
SHTN1-204ENST00000392903 ZDHHC9Q9Y397 364 aa18.21■□□□□ 0.51
SHTN1-204ENST00000392903 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.51
SHTN1-204ENST00000392903 UBTFL1P0CB47 393 aaPredicted RBP18.21■□□□□ 0.51
SHTN1-204ENST00000392903 DMTNQ08495 405 aa18.21■□□□□ 0.51
SHTN1-204ENST00000392903 SYCE3A1L190 88 aa18.2■□□□□ 0.5
SHTN1-204ENST00000392903 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
SHTN1-204ENST00000392903 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
SHTN1-204ENST00000392903 C19orf44Q9H6X5 657 aa18.2■□□□□ 0.5
SHTN1-204ENST00000392903 MBD3O95983 291 aa18.2■□□□□ 0.5
SHTN1-204ENST00000392903 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
SHTN1-204ENST00000392903 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
SHTN1-204ENST00000392903 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
SHTN1-204ENST00000392903 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
SHTN1-204ENST00000392903 RNMTO43148 476 aaKnown RBP18.19■□□□□ 0.5
SHTN1-204ENST00000392903 ST18O60284 1047 aa18.19■□□□□ 0.5
SHTN1-204ENST00000392903 CASC1Q6TDU7 716 aa18.18■□□□□ 0.5
SHTN1-204ENST00000392903 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
SHTN1-204ENST00000392903 PXDNQ92626 1479 aa18.18■□□□□ 0.5
SHTN1-204ENST00000392903 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
SHTN1-204ENST00000392903 NBPF7P0C2Y1 421 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-204ENST00000392903 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
SHTN1-204ENST00000392903 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
SHTN1-204ENST00000392903 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
SHTN1-204ENST00000392903 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
SHTN1-204ENST00000392903 ARID3AQ99856 593 aa18.17■□□□□ 0.5
SHTN1-204ENST00000392903 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
SHTN1-204ENST00000392903 OSBPL3Q9H4L5 887 aa18.16■□□□□ 0.5
SHTN1-204ENST00000392903 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
SHTN1-204ENST00000392903 ATF3P18847 181 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHTN1-204ENST00000392903 PPP1R42Q7Z4L9 355 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 CABLES1Q8TDN4 633 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 MX1P20591 662 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
SHTN1-204ENST00000392903 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHTN1-204ENST00000392903 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.5
SHTN1-204ENST00000392903 RGPD5Q99666 1765 aa18.14■□□□□ 0.49
SHTN1-204ENST00000392903 SLIT3O75094 1523 aa18.14■□□□□ 0.49
SHTN1-204ENST00000392903 TRIM6-TRIM34B2RNG4 842 aa18.14■□□□□ 0.49
SHTN1-204ENST00000392903 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
SHTN1-204ENST00000392903 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
SHTN1-204ENST00000392903 RILPL2Q969X0 211 aa18.14■□□□□ 0.49
SHTN1-204ENST00000392903 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
SHTN1-204ENST00000392903 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
SHTN1-204ENST00000392903 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
SHTN1-204ENST00000392903 PTMAP06454 111 aaKnown RBP18.13■□□□□ 0.49
SHTN1-204ENST00000392903 HOXB7P09629 217 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 BEND3Q5T5X7 828 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 TSPY26PQ9H489 355 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 SRGAP3O43295 1099 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
SHTN1-204ENST00000392903 RNF214Q8ND24 703 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 ZHX1Q9UKY1 873 aaPredicted RBP18.13■□□□□ 0.49
SHTN1-204ENST00000392903 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 ERBB3P21860 1342 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 SALL3Q9BXA9 1300 aa18.13■□□□□ 0.49
SHTN1-204ENST00000392903 ERC2O15083 957 aa18.12■□□□□ 0.49
SHTN1-204ENST00000392903 NUTM1Q86Y26 1132 aa18.12■□□□□ 0.49
SHTN1-204ENST00000392903 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
SHTN1-204ENST00000392903 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms