RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 RIPK4P57078 832 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 PNISRQ8TF01 805 aaKnown RBP15.6■□□□□ 0.09
RFC4-202ENST00000392481 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 USP42Q9H9J4 1324 aaKnown RBP15.6■□□□□ 0.09
RFC4-202ENST00000392481 MMP10P09238 476 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 LMOD3Q0VAK6 560 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
RFC4-202ENST00000392481 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
RFC4-202ENST00000392481 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
RFC4-202ENST00000392481 SRP68Q9UHB9 627 aaKnown RBP15.59■□□□□ 0.09
RFC4-202ENST00000392481 COL15A1P39059 1388 aa15.58■□□□□ 0.08
RFC4-202ENST00000392481 ANP32CO43423 234 aa15.58■□□□□ 0.08
RFC4-202ENST00000392481 ZPR1O75312 459 aa15.58■□□□□ 0.08
RFC4-202ENST00000392481 CANXP27824 592 aaKnown RBP15.58■□□□□ 0.08
RFC4-202ENST00000392481 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
RFC4-202ENST00000392481 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
RFC4-202ENST00000392481 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
RFC4-202ENST00000392481 GOLGB1Q14789 3259 aaKnown RBP15.57■□□□□ 0.08
RFC4-202ENST00000392481 NARFQ9UHQ1 456 aa15.57■□□□□ 0.08
RFC4-202ENST00000392481 KDM3BQ7LBC6 1761 aa15.56■□□□□ 0.08
RFC4-202ENST00000392481 A0A087WZG4 1122 aa15.56■□□□□ 0.08
RFC4-202ENST00000392481 A1BGP04217 495 aa15.56■□□□□ 0.08
RFC4-202ENST00000392481 IL6STP40189 918 aaPredicted RBP15.56■□□□□ 0.08
RFC4-202ENST00000392481 FKBP8Q14318 412 aa15.56■□□□□ 0.08
RFC4-202ENST00000392481 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
RFC4-202ENST00000392481 USP16Q9Y5T5 823 aa15.56■□□□□ 0.08
RFC4-202ENST00000392481 UTRNP46939 3433 aa15.55■□□□□ 0.08
RFC4-202ENST00000392481 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
RFC4-202ENST00000392481 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
RFC4-202ENST00000392481 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
RFC4-202ENST00000392481 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
RFC4-202ENST00000392481 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
RFC4-202ENST00000392481 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
RFC4-202ENST00000392481 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
RFC4-202ENST00000392481 TM4SF1P30408 202 aa15.53■□□□□ 0.08
RFC4-202ENST00000392481 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
RFC4-202ENST00000392481 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
RFC4-202ENST00000392481 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
RFC4-202ENST00000392481 GPR162Q16538 588 aa15.52■□□□□ 0.08
RFC4-202ENST00000392481 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
RFC4-202ENST00000392481 DDR1Q08345 913 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
RFC4-202ENST00000392481 KIF13BQ9NQT8 1826 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 APAF1O14727 1248 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
RFC4-202ENST00000392481 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
RFC4-202ENST00000392481 NFIXQ14938 502 aa15.5■□□□□ 0.07
RFC4-202ENST00000392481 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
RFC4-202ENST00000392481 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
RFC4-202ENST00000392481 CHL1O00533 1208 aa15.49■□□□□ 0.07
RFC4-202ENST00000392481 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
RFC4-202ENST00000392481 TGFB2P61812 414 aa15.49■□□□□ 0.07
RFC4-202ENST00000392481 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
RFC4-202ENST00000392481 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
RFC4-202ENST00000392481 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
RFC4-202ENST00000392481 GRIN3BO60391 1043 aa15.48■□□□□ 0.07
RFC4-202ENST00000392481 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
RFC4-202ENST00000392481 DZIP3Q86Y13 1208 aaKnown RBP15.48■□□□□ 0.07
RFC4-202ENST00000392481 SCN7AQ01118 1682 aa15.47■□□□□ 0.07
RFC4-202ENST00000392481 YBX3P16989 372 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■■□□□ 11.9
RFC4-202ENST00000392481 PXDNLA1KZ92 1463 aa15.47■□□□□ 0.07
RFC4-202ENST00000392481 RGL2O15211 777 aa15.46■□□□□ 0.07
RFC4-202ENST00000392481 CHD4Q14839 1912 aa15.46■□□□□ 0.06
RFC4-202ENST00000392481 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 SERPINB2P05120 415 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 YY1P25490 414 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 CALD1Q05682 793 aaKnown RBP15.45■□□□□ 0.06
RFC4-202ENST00000392481 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 CLEC4GQ6UXB4 293 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 BICDL1Q6ZP65 573 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 CFAP44Q96MT7 982 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
RFC4-202ENST00000392481 KIAA1551Q9HCM1 1747 aa15.45■□□□□ 0.06
RFC4-202ENST00000392481 AFDNP55196 1824 aaKnown RBP15.45■□□□□ 0.06
RFC4-202ENST00000392481 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
RFC4-202ENST00000392481 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
RFC4-202ENST00000392481 DPEP1P16444 411 aa15.44■□□□□ 0.06
RFC4-202ENST00000392481 ZNF652Q9Y2D9 606 aa15.44■□□□□ 0.06
RFC4-202ENST00000392481 NRXN2Q9P2S2 1712 aa15.44■□□□□ 0.06
RFC4-202ENST00000392481 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
RFC4-202ENST00000392481 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
RFC4-202ENST00000392481 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
RFC4-202ENST00000392481 CARMIL3Q8ND23 1372 aa15.43■□□□□ 0.06
RFC4-202ENST00000392481 IFT57Q9NWB7 429 aa15.43■□□□□ 0.06
RFC4-202ENST00000392481 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
RFC4-202ENST00000392481 KCNA3P22001 575 aa15.42■□□□□ 0.06
RFC4-202ENST00000392481 GNAI1P63096 354 aa15.42■□□□□ 0.06
RFC4-202ENST00000392481 CCDC27Q2M243 656 aa15.42■□□□□ 0.06
RFC4-202ENST00000392481 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
RFC4-202ENST00000392481 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
RFC4-202ENST00000392481 ERVV-1B6SEH8 477 aa15.41■□□□□ 0.06
RFC4-202ENST00000392481 HOXB7P09629 217 aa15.41■□□□□ 0.06
RFC4-202ENST00000392481 MYL6BP14649 208 aa15.41■□□□□ 0.06
RFC4-202ENST00000392481 KRT24Q2M2I5 525 aa15.41■□□□□ 0.06
RFC4-202ENST00000392481 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
RFC4-202ENST00000392481 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms