RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 A0A1W2PNR3 127 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 DCDC2BA2VCK2 349 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 TMEM229AB2RXF0 380 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 GNB5O14775 395 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 ARAFP10398 606 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 MAPTP10636 758 aaKnown RBP4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 GTF2E1P29083 439 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 SMTNP53814 917 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 EIF4G2P78344 907 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 SLFNL1Q499Z3 407 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 TBC1D9Q6ZT07 1266 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 CHSY3Q70JA7 882 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 KRTAP4-8Q9BYQ9 185 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 STRN4Q9NRL3 753 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 SERTAD1Q9UHV2 236 aa4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 IQSEC3Q9UPP2 1182 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1228P-201ENST00000391014 ATXN7O15265 892 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PCBP4P57723 403 aaKnown RBP4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 ALYREFQ86V81 257 aaKnown RBP4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 NLRP8Q86W28 1048 aa4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 TRIM11Q96F44 468 aa4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 ZIC5Q96T25 663 aa4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PARP3Q9Y6F1 533 aa4.18□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PIK3CDO00329 1044 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 KHNYNO15037 678 aaKnown RBP4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 DOC2BQ14184 412 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 ARSJQ5FYB0 599 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 FIGNL1Q6PIW4 674 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PLPP7Q8NBV4 271 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 SLC4A9Q96Q91 983 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 NIFKQ9BYG3 293 aaKnown RBP4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 GDPD2Q9HCC8 539 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PCDHGA11Q9Y5H2 935 aa4.17□□□□□ -1.74
RNU6-1228P-201ENST00000391014 A6NJY4 79 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 CDK2AP1O14519 115 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 TXLNAP40222 546 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 MTFR1Q15390 333 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 FAM182BQ5T319 152 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 C1orf216Q8TAB5 229 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 PLVAPQ9BX97 442 aa4.16□□□□□ -1.74
RNU6-1228P-201ENST00000391014 APBB1O00213 710 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 PIK3R2O00459 728 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ADH6P28332 368 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 MAP7D1Q3KQU3 841 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ZDHHC1Q8WTX9 485 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 C7orf43Q8WVR3 580 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SIRT1Q96EB6 747 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 MDFIQ99750 246 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SEMA6BQ9H3T3 888 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 CABP1Q9NZU7 370 aa4.15□□□□□ -1.75
RNU6-1228P-201ENST00000391014 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 EFSO43281 561 aa4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ABL2P42684 1182 aa4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 COL9A3Q14050 684 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ZNF468Q5VIY5 522 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 AVENQ9NQS1 362 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ZDHHC3Q9NYG2 299 aa4.14□□□□□ -1.75
RNU6-1228P-201ENST00000391014 FAM157BP0CG42 384 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SFSWAPQ12872 951 aaKnown RBP4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SEMA3FQ13275 785 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 NBPF1Q3BBV0 1214 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 FOXD4L6Q3SYB3 417 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 TBCELQ5QJ74 424 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SH3PXD2AQ5TCZ1 1133 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 FOXD4L3Q6VB84 417 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 C8orf86Q6ZUL3 223 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SLC30A3Q99726 388 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 NOP53Q9NZM5 478 aaKnown RBP4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 MARK1Q9P0L2 795 aa4.13□□□□□ -1.75
RNU6-1228P-201ENST00000391014 TATP17735 454 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 GATA4P43694 442 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 RSPO4Q2I0M5 234 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 NKAPLQ5M9Q1 402 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SAMD5Q5TGI4 173 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 LRRC69Q6ZNQ3 347 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 BICDL1Q6ZP65 573 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SYT9Q86SS6 491 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 L3MBTL2Q969R5 705 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 PSMG3-AS1Q96PY0 264 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 PRM3Q9NNZ6 103 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ZNF358Q9NW07 568 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SCHIP1Q9P0W5 487 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 PRR12Q9ULL5 1215 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 STARD13Q9Y3M8 1113 aa4.12□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ELOA3CA0A087WX78 387 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ELOA3DA6NLF2 546 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 EML1O00423 815 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 NOS2P35228 1153 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 EPHA4P54764 986 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ELOA3BQ3SY89 546 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 TNS4Q8IZW8 715 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ELOA3Q8NG57 546 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 TPSG1Q9NRR2 321 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 GJA3Q9Y6H8 435 aa4.11□□□□□ -1.75
RNU6-1228P-201ENST00000391014 ZBTB7BO15156 539 aaPredicted RBP4.1□□□□□ -1.75
RNU6-1228P-201ENST00000391014 SPATA31C1P0DKV0 1188 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms