RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 CANXP27824 592 aaKnown RBP19.72■□□□□ 0.75
SNRPN-202ENST00000390687 FKBP8Q14318 412 aa19.72■□□□□ 0.75
SNRPN-202ENST00000390687 TAF7Q15545 349 aaPredicted RBP19.72■□□□□ 0.75
SNRPN-202ENST00000390687 C4AP0C0L4 1744 aa19.72■□□□□ 0.75
SNRPN-202ENST00000390687 MAPK8IP3Q9UPT6 1336 aa19.72■□□□□ 0.75
SNRPN-202ENST00000390687 MIS18AQ9NYP9 233 aa19.71■□□□□ 0.75
SNRPN-202ENST00000390687 YY1P25490 414 aa19.71■□□□□ 0.75
SNRPN-202ENST00000390687 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
SNRPN-202ENST00000390687 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
SNRPN-202ENST00000390687 ZPR1O75312 459 aa19.7■□□□□ 0.74
SNRPN-202ENST00000390687 EIF5P55010 431 aaKnown RBP19.7■□□□□ 0.74
SNRPN-202ENST00000390687 USPL1Q5W0Q7 1092 aa19.7■□□□□ 0.74
SNRPN-202ENST00000390687 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
SNRPN-202ENST00000390687 USP16Q9Y5T5 823 aa19.7■□□□□ 0.74
SNRPN-202ENST00000390687 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
SNRPN-202ENST00000390687 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
SNRPN-202ENST00000390687 A1BGP04217 495 aa19.69■□□□□ 0.74
SNRPN-202ENST00000390687 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
SNRPN-202ENST00000390687 COL15A1P39059 1388 aa19.68■□□□□ 0.74
SNRPN-202ENST00000390687 YBX3P16989 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNRPN-202ENST00000390687 TM4SF1P30408 202 aa19.68■□□□□ 0.74
SNRPN-202ENST00000390687 PARP3Q9Y6F1 533 aa19.68■□□□□ 0.74
SNRPN-202ENST00000390687 SNRPA1P09661 255 aaKnown RBP19.67■□□□□ 0.74
SNRPN-202ENST00000390687 RIPK4P57078 832 aa19.67■□□□□ 0.74
SNRPN-202ENST00000390687 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
SNRPN-202ENST00000390687 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
SNRPN-202ENST00000390687 DDR1Q08345 913 aa19.66■□□□□ 0.74
SNRPN-202ENST00000390687 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNRPN-202ENST00000390687 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
SNRPN-202ENST00000390687 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
SNRPN-202ENST00000390687 IL6STP40189 918 aaPredicted RBP19.66■□□□□ 0.74
SNRPN-202ENST00000390687 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
SNRPN-202ENST00000390687 A0A087WZG4 1122 aa19.64■□□□□ 0.73
SNRPN-202ENST00000390687 RUNDC1Q96C34 613 aa19.64■□□□□ 0.73
SNRPN-202ENST00000390687 POLRMTO00411 1230 aaKnown RBP19.63■□□□□ 0.73
SNRPN-202ENST00000390687 GRIN3BO60391 1043 aa19.63■□□□□ 0.73
SNRPN-202ENST00000390687 TGFB2P61812 414 aa19.63■□□□□ 0.73
SNRPN-202ENST00000390687 NFIXQ14938 502 aa19.63■□□□□ 0.73
SNRPN-202ENST00000390687 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
SNRPN-202ENST00000390687 TBC1D2BQ9UPU7 963 aa19.63■□□□□ 0.73
SNRPN-202ENST00000390687 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
SNRPN-202ENST00000390687 ZNF330Q9Y3S2 320 aaPredicted RBP19.63■□□□□ 0.73
SNRPN-202ENST00000390687 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
SNRPN-202ENST00000390687 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
SNRPN-202ENST00000390687 C10orf71Q711Q0 1435 aa19.62■□□□□ 0.73
SNRPN-202ENST00000390687 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
SNRPN-202ENST00000390687 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
SNRPN-202ENST00000390687 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
SNRPN-202ENST00000390687 CHD4Q14839 1912 aa19.6■□□□□ 0.73
SNRPN-202ENST00000390687 NBPF26B4DH59 902 aa19.6■□□□□ 0.73
SNRPN-202ENST00000390687 GIGYF1O75420 1035 aaPredicted RBP19.6■□□□□ 0.73
SNRPN-202ENST00000390687 NBPF10Q6P3W6 841 aaKnown RBP19.6■□□□□ 0.73
SNRPN-202ENST00000390687 NBPF15Q8N660 670 aa19.6■□□□□ 0.73
SNRPN-202ENST00000390687 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
SNRPN-202ENST00000390687 DPEP1P16444 411 aa19.59■□□□□ 0.73
SNRPN-202ENST00000390687 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
SNRPN-202ENST00000390687 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
SNRPN-202ENST00000390687 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
SNRPN-202ENST00000390687 TRIM35Q9UPQ4 493 aa19.59■□□□□ 0.73
SNRPN-202ENST00000390687 KCNA3P22001 575 aa19.58■□□□□ 0.73
SNRPN-202ENST00000390687 KDM3BQ7LBC6 1761 aa19.58■□□□□ 0.72
SNRPN-202ENST00000390687 CAMTA2O94983 1202 aa19.57■□□□□ 0.72
SNRPN-202ENST00000390687 SERPINB2P05120 415 aa19.57■□□□□ 0.72
SNRPN-202ENST00000390687 TBC1D9BQ66K14 1250 aa19.57■□□□□ 0.72
SNRPN-202ENST00000390687 BICDL1Q6ZP65 573 aa19.57■□□□□ 0.72
SNRPN-202ENST00000390687 DZIP3Q86Y13 1208 aaKnown RBP19.57■□□□□ 0.72
SNRPN-202ENST00000390687 TSPYL4Q9UJ04 414 aa19.57■□□□□ 0.72
SNRPN-202ENST00000390687 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
SNRPN-202ENST00000390687 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
SNRPN-202ENST00000390687 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
SNRPN-202ENST00000390687 AFDNP55196 1824 aaKnown RBP19.53■□□□□ 0.72
SNRPN-202ENST00000390687 CHRNA5P30532 468 aa19.53■□□□□ 0.72
SNRPN-202ENST00000390687 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
SNRPN-202ENST00000390687 BCS1LQ9Y276 419 aa19.53■□□□□ 0.72
SNRPN-202ENST00000390687 CHL1O00533 1208 aa19.52■□□□□ 0.72
SNRPN-202ENST00000390687 APAF1O14727 1248 aa19.52■□□□□ 0.72
SNRPN-202ENST00000390687 PIM2Q9P1W9 311 aa19.52■□□□□ 0.72
SNRPN-202ENST00000390687 NRXN2Q9P2S2 1712 aa19.52■□□□□ 0.71
SNRPN-202ENST00000390687 ANP32CO43423 234 aa19.51■□□□□ 0.71
SNRPN-202ENST00000390687 CLEC4GQ6UXB4 293 aa19.51■□□□□ 0.71
SNRPN-202ENST00000390687 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
SNRPN-202ENST00000390687 SCN7AQ01118 1682 aa19.51■□□□□ 0.71
SNRPN-202ENST00000390687 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
SNRPN-202ENST00000390687 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
SNRPN-202ENST00000390687 MYL6BP14649 208 aa19.49■□□□□ 0.71
SNRPN-202ENST00000390687 HLFQ16534 295 aa19.49■□□□□ 0.71
SNRPN-202ENST00000390687 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
SNRPN-202ENST00000390687 BRCA1P38398 1863 aaKnown RBP19.48■□□□□ 0.71
SNRPN-202ENST00000390687 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
SNRPN-202ENST00000390687 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
SNRPN-202ENST00000390687 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
SNRPN-202ENST00000390687 PRR5LQ6MZQ0 368 aa19.48■□□□□ 0.71
SNRPN-202ENST00000390687 CCDC24Q8N4L8 307 aa19.48■□□□□ 0.71
SNRPN-202ENST00000390687 ZNF652Q9Y2D9 606 aa19.48■□□□□ 0.71
SNRPN-202ENST00000390687 RGL2O15211 777 aa19.47■□□□□ 0.71
SNRPN-202ENST00000390687 PDIA6Q15084 440 aa19.47■□□□□ 0.71
SNRPN-202ENST00000390687 KRT24Q2M2I5 525 aa19.47■□□□□ 0.71
SNRPN-202ENST00000390687 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
SNRPN-202ENST00000390687 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
SNRPN-202ENST00000390687 CFAP44Q96MT7 982 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms