RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 IKBKBO14920 756 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 DHX15O43143 795 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 EGFRP00533 1210 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 F11P03951 625 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CCNYL3P0C7X3 344 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 C1QTNF9P0C862 333 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 NID1P14543 1247 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 RHOQP17081 205 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 JUNDP17535 347 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 BMP7P18075 431 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 POU3F3P20264 500 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 FUT4P22083 530 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ALAS2P22557 587 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 FGFR3P22607 806 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 NOS3P29474 1203 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 GRM5P41594 1212 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 IREB2P48200 963 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 FUT2Q10981 343 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 COL19A1Q14993 1142 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 PLCL1Q15111 1095 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 KCNA10Q16322 511 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 MLANAQ16655 118 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF827Q17R98 1081 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 MSMPQ1L6U9 139 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ELOA3BQ3SY89 546 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 LINC01559Q495D7 138 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 GRIPAP1Q4V328 841 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 TRAPPC3LQ5T215 181 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 FOXD4L5Q5VV16 416 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 RNF43Q68DV7 783 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 SHISA2Q6UWI4 295 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 NFXL1Q6ZNB6 911 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 GRASPQ7Z6J2 395 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 FCHSD1Q86WN1 690 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ZFPM1Q8IX07 1006 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CCDC116Q8IYX3 515 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 DZIP1LQ8IYY4 767 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ELOA3Q8NG57 546 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 GIMAP7Q8NHV1 300 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF417Q8TAU3 575 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 RBM46Q8TBY0 533 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 DDX12PQ92771 950 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ABHD17AQ96GS6 310 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 MEGF10Q96KG7 1140 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 AGBL1Q96MI9 1066 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 KCNC2Q96PR1 638 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CRAMP1Q96RY5 1269 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF587Q96SQ5 575 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 GAS2L1Q99501 681 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 USB1Q9BQ65 265 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 NUDT12Q9BQG2 462 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP1-5Q9BYS1 174 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 UNKLQ9H9P5 680 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CD320Q9NPF0 282 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 DLL4Q9NR61 685 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 BSDC1Q9NW68 430 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CCDC39Q9UFE4 941 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CNOT11Q9UKZ1 510 aaKnown RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 PITPNM2Q9BZ72 1349 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 IRS2Q9Y4H2 1338 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ANKRD33BA6NCL7 494 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 RCCD1A6NED2 376 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 C1QTNF3-AMACRE9PGA6 284 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 K7ESM1 405 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 STK25O00506 426 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 FZD7O75084 574 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 GIGYF1O75420 1035 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 SASH1O94885 1247 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ALBP02768 609 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 KRT1P04264 644 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 TMEM253P0C7T8 217 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 MED14OSP0DP75 135 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 HRCP23327 699 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PDE4AP27815 886 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ACVRL1P37023 503 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 IL12RB1P42701 662 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 RNF144AP50876 292 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 LINC00310P59036 64 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 NANOS3P60323 173 aaKnown RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 CTBSQ01459 385 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PLP2Q04941 152 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 KCNMB1Q16558 191 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 CPSF6Q16630 551 aaKnown RBP eCLIP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF792Q3KQV3 632 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 EPHA10Q5JZY3 1008 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PPP1R26Q5T8A7 1209 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF468Q5VIY5 522 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 HHIPL2Q6UWX4 724 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 MPRIPQ6WCQ1 1025 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 KRTAP5-5Q701N2 237 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 PRICKLE2Q7Z3G6 844 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 ZSWIM9Q86XI8 627 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 FMR1NBQ8N0W7 255 aaPredicted RBP0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 DNAJC5GQ8N7S2 189 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 RDH13Q8NBN7 331 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 GLIS3Q8NEA6 775 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 SHKBP1Q8TBC3 707 aa0.19□□□□□ -2.38
TRAJ28-201ENST00000390509 BAP1Q92560 729 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms