RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 EPHA4P54764 986 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 GDF10P55107 478 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 PTPROQ16827 1216 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 C4orf48Q5BLP8 95 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 COX20Q5RI15 118 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 NBPF6Q5VWK0 638 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 PPP1R18Q6NYC8 613 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 POTEHQ6S545 545 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 POTEEQ6S8J3 1075 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 NOL8Q76FK4 1167 aaKnown RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 HS2ST1Q7LGA3 356 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 USP48Q86UV5 1035 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 TNS4Q8IZW8 715 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 NLGN1Q8N2Q7 840 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 CCDC24Q8N4L8 307 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 ZNF511Q8NB15 262 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 ANKK1Q8NFD2 765 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 ZCRB1Q8TBF4 217 aaKnown RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 CHMP7Q8WUX9 453 aaPredicted RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 BAP1Q92560 729 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 KCNB2Q92953 911 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 MYO19Q96H55 970 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 SPACA7Q96KW9 195 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 NBPF4Q96M43 638 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 CSRNP1Q96S65 589 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 KCTD15Q96SI1 283 aaPredicted RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 C2orf49Q9BVC5 232 aaPredicted RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 NIF3L1Q9GZT8 377 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 DNAJC25Q9H1X3 360 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 TSPAN10Q9H1Z9 355 aaPredicted RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 SRA1Q9HD15 236 aaKnown RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 TSR3Q9UJK0 312 aaKnown RBP2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 HPS5Q9UPZ3 1129 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 SPG7Q9UQ90 795 aa2.38□□□□□ -2.03
TRAJ39-201ENST00000390498 USP31Q70CQ4 1352 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 hCG_2014768A0A024R1R8 64 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 A0A1W2PRU2 124 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 RAB11FIP3O75154 756 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 ADH1BP00325 375 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CTSHP09668 335 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 FGRP09769 529 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 XRCC5P13010 732 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 EIF4BP23588 611 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 GJA8P48165 433 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 ERVK-9P63128 1117 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 RACK1P63244 317 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 FOXK2Q01167 660 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 ZNF394Q53GI3 561 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 VARS2Q5ST30 1063 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 RNF187Q5TA31 235 aaPredicted RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CCDC181Q5TID7 509 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CC2D2BQ6DHV5 1058 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 MCF2L2Q86YR7 1114 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CKAP2LQ8IYA6 745 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 MICAL1Q8TDZ2 1067 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 FOXJ1Q92949 421 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 MKL1Q969V6 931 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 MRFAP1L1Q96HT8 127 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 GPATCH3Q96I76 525 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 SETDB2Q96T68 719 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CFHR5Q9BXR6 569 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 TMX1Q9H3N1 280 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 QTRT2Q9H974 415 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 PRDM9Q9NQV7 894 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 POLIQ9UNA4 740 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 AXIN2Q9Y2T1 843 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 NOP58Q9Y2X3 529 aaKnown RBP2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 CHMP3Q9Y3E7 222 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 MAP4K5Q9Y4K4 846 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 ERBB3P21860 1342 aa2.37□□□□□ -2.03
TRAJ39-201ENST00000390498 A6NJY4 79 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 GOLGA8CPA6NN73 597 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ERVH48-1M5A8F1 160 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 CDK2AP1O14519 115 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 EIF1AYO14602 144 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ENPP3O14638 875 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ZBTB39O15060 712 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 GNRH1P01148 92 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 RPLP1P05386 114 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 PCSK2P16519 638 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ATF4P18848 351 aaPredicted RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 SCTRP47872 440 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ST13P50502 369 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 SMTNP53814 917 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ANAPC15P60006 121 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 PSMA6P60900 246 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 DNM1Q05193 864 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 DHX9Q08211 1270 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 BMS1Q14692 1282 aaKnown RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 TCEAL1Q15170 157 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 MTFR1Q15390 333 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 C11orf91Q3C1V1 193 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ESCO1Q5FWF5 840 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 POTEAQ6S8J7 498 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 JAZF1Q86VZ6 243 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 CERS3Q8IU89 383 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 SLC9A9Q8IVB4 645 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ZNF687Q8N1G0 1237 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 RASGRP4Q8TDF6 673 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms