RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
TRBV28-201ENST00000390400 TESK2Q96S53 571 aa10.01□□□□□ -0.81
TRBV28-201ENST00000390400 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
TRBV28-201ENST00000390400 ADGRL3Q9HAR2 1447 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 SIPA1L2Q9P2F8 1722 aaPredicted RBP10□□□□□ -0.81
TRBV28-201ENST00000390400 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
TRBV28-201ENST00000390400 TMF1P82094 1093 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 ZNF687Q8N1G0 1237 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 LRRC7Q96NW7 1537 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 EVC2Q86UK5 1308 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 ADGRB2O60241 1585 aa10□□□□□ -0.81
TRBV28-201ENST00000390400 NALCNQ8IZF0 1738 aa9.99□□□□□ -0.81
TRBV28-201ENST00000390400 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
TRBV28-201ENST00000390400 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
TRBV28-201ENST00000390400 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
TRBV28-201ENST00000390400 LTBP4Q8N2S1 1624 aa9.99□□□□□ -0.81
TRBV28-201ENST00000390400 XIRP1Q702N8 1843 aaKnown RBP9.98□□□□□ -0.81
TRBV28-201ENST00000390400 TULP4Q9NRJ4 1543 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 CDC42BPGQ6DT37 1551 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 FAM205CA6NFA0 338 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 NPM2Q86SE8 214 aaKnown RBP9.98□□□□□ -0.81
TRBV28-201ENST00000390400 RETREG3Q86VR2 466 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
TRBV28-201ENST00000390400 PBX2P40425 430 aa9.97□□□□□ -0.81
TRBV28-201ENST00000390400 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
TRBV28-201ENST00000390400 C19orf44Q9H6X5 657 aa9.97□□□□□ -0.81
TRBV28-201ENST00000390400 MSH6P52701 1360 aa9.97□□□□□ -0.81
TRBV28-201ENST00000390400 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.82
TRBV28-201ENST00000390400 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.82
TRBV28-201ENST00000390400 EMP3P54852 163 aa9.96□□□□□ -0.82
TRBV28-201ENST00000390400 LYPD8Q6UX82 237 aa9.96□□□□□ -0.82
TRBV28-201ENST00000390400 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
TRBV28-201ENST00000390400 GZF1Q9H116 711 aaPredicted RBP9.96□□□□□ -0.82
TRBV28-201ENST00000390400 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
TRBV28-201ENST00000390400 DCCP43146 1447 aa9.96□□□□□ -0.82
TRBV28-201ENST00000390400 ATF3P18847 181 aa9.95□□□□□ -0.82
TRBV28-201ENST00000390400 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
TRBV28-201ENST00000390400 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
TRBV28-201ENST00000390400 KIF7Q2M1P5 1343 aa9.95□□□□□ -0.82
TRBV28-201ENST00000390400 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
TRBV28-201ENST00000390400 FMN2Q9NZ56 1722 aa9.95□□□□□ -0.82
TRBV28-201ENST00000390400 ATAD2Q6PL18 1390 aa9.94□□□□□ -0.82
TRBV28-201ENST00000390400 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
TRBV28-201ENST00000390400 HRO43593 1189 aa9.94□□□□□ -0.82
TRBV28-201ENST00000390400 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
TRBV28-201ENST00000390400 BRICD5Q6PL45 260 aa9.94□□□□□ -0.82
TRBV28-201ENST00000390400 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 APLP1P51693 650 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 NBPF3Q9H094 633 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 MAFBQ9Y5Q3 323 aaPredicted RBP9.93□□□□□ -0.82
TRBV28-201ENST00000390400 ITSN1Q15811 1721 aa9.93□□□□□ -0.82
TRBV28-201ENST00000390400 ATP7BP35670 1465 aa9.92□□□□□ -0.82
TRBV28-201ENST00000390400 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
TRBV28-201ENST00000390400 TK2O00142 265 aa9.92□□□□□ -0.82
TRBV28-201ENST00000390400 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
TRBV28-201ENST00000390400 FBXO45P0C2W1 286 aa9.92□□□□□ -0.82
TRBV28-201ENST00000390400 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
TRBV28-201ENST00000390400 HS3ST6Q96QI5 342 aa9.92□□□□□ -0.82
TRBV28-201ENST00000390400 IQSEC2Q5JU85 1478 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
TRBV28-201ENST00000390400 PRR36Q9H6K5 1346 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 TOPAZ1Q8N9V7 1692 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
TRBV28-201ENST00000390400 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 USP32Q8NFA0 1604 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
TRBV28-201ENST00000390400 MST1RQ04912 1400 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 ANP32CO43423 234 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 SLC4A3P48751 1232 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 BCAMP50895 628 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 RGS22Q8NE09 1264 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 LRCH3Q96II8 777 aa9.9□□□□□ -0.82
TRBV28-201ENST00000390400 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.9□□□□□ -0.82
TRBV28-201ENST00000390400 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.83
TRBV28-201ENST00000390400 MYOM1P52179 1685 aa9.9□□□□□ -0.83
TRBV28-201ENST00000390400 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
TRBV28-201ENST00000390400 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
TRBV28-201ENST00000390400 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
TRBV28-201ENST00000390400 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRBV28-201ENST00000390400 NR1H3Q13133 447 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 SEMA3FQ13275 785 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
TRBV28-201ENST00000390400 LHX8Q68G74 356 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 OCSTAMPQ9BR26 566 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
TRBV28-201ENST00000390400 TOM1O60784 492 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms