RNA–Protein interactions for RNA: ENST00000389825.7

GREB1-205, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-205ENST00000389825 ZNF853P0CG23 659 aa20.39■□□□□ 0.85
GREB1-205ENST00000389825 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
GREB1-205ENST00000389825 CICQ96RK0 1608 aaPredicted RBP20.39■□□□□ 0.85
GREB1-205ENST00000389825 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 CHL1O00533 1208 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 PRELPP51888 382 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 JMYQ8N9B5 988 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 SLC52A2Q9HAB3 445 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
GREB1-205ENST00000389825 TSPYL4Q9UJ04 414 aa20.38■□□□□ 0.85
GREB1-205ENST00000389825 KDM6AO15550 1401 aaPredicted RBP20.38■□□□□ 0.85
GREB1-205ENST00000389825 CAPN15O75808 1086 aa20.37■□□□□ 0.85
GREB1-205ENST00000389825 PCNTO95613 3336 aa20.37■□□□□ 0.85
GREB1-205ENST00000389825 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
GREB1-205ENST00000389825 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
GREB1-205ENST00000389825 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
GREB1-205ENST00000389825 TNS4Q8IZW8 715 aa20.35■□□□□ 0.85
GREB1-205ENST00000389825 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
GREB1-205ENST00000389825 MBIPQ9NS73 344 aa20.35■□□□□ 0.85
GREB1-205ENST00000389825 TSR2Q969E8 191 aaKnown RBP20.34■□□□□ 0.85
GREB1-205ENST00000389825 TMOD3Q9NYL9 352 aa20.34■□□□□ 0.85
GREB1-205ENST00000389825 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
GREB1-205ENST00000389825 MRC1P22897 1456 aa20.34■□□□□ 0.85
GREB1-205ENST00000389825 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
GREB1-205ENST00000389825 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
GREB1-205ENST00000389825 RBM46Q8TBY0 533 aaKnown RBP20.33■□□□□ 0.85
GREB1-205ENST00000389825 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
GREB1-205ENST00000389825 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
GREB1-205ENST00000389825 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
GREB1-205ENST00000389825 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
GREB1-205ENST00000389825 UBR3Q6ZT12 1888 aa20.3■□□□□ 0.84
GREB1-205ENST00000389825 ITGB4P16144 1822 aa20.3■□□□□ 0.84
GREB1-205ENST00000389825 EXOSC9Q06265 439 aaKnown RBP20.29■□□□□ 0.84
GREB1-205ENST00000389825 NMRK2Q9NPI5 230 aa20.29■□□□□ 0.84
GREB1-205ENST00000389825 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
GREB1-205ENST00000389825 FSTL1Q12841 308 aa20.28■□□□□ 0.84
GREB1-205ENST00000389825 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
GREB1-205ENST00000389825 AK7Q96M32 723 aa20.28■□□□□ 0.84
GREB1-205ENST00000389825 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
GREB1-205ENST00000389825 SOS1Q07889 1333 aaPredicted RBP20.28■□□□□ 0.84
GREB1-205ENST00000389825 ZNF428Q96B54 188 aa20.27■□□□□ 0.84
GREB1-205ENST00000389825 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
GREB1-205ENST00000389825 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.83
GREB1-205ENST00000389825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
GREB1-205ENST00000389825 HTRA3P83110 453 aa20.26■□□□□ 0.83
GREB1-205ENST00000389825 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
GREB1-205ENST00000389825 AMIGO3Q86WK7 504 aa20.26■□□□□ 0.83
GREB1-205ENST00000389825 PIGBQ92521 554 aa20.26■□□□□ 0.83
GREB1-205ENST00000389825 KIF13BQ9NQT8 1826 aa20.26■□□□□ 0.83
GREB1-205ENST00000389825 SSFA2P28290 1259 aa20.25■□□□□ 0.83
GREB1-205ENST00000389825 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
GREB1-205ENST00000389825 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
GREB1-205ENST00000389825 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
GREB1-205ENST00000389825 HOXB7P09629 217 aa20.24■□□□□ 0.83
GREB1-205ENST00000389825 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
GREB1-205ENST00000389825 SMARCC1Q92922 1105 aaPredicted RBP20.24■□□□□ 0.83
GREB1-205ENST00000389825 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
GREB1-205ENST00000389825 PHF14O94880 888 aa20.23■□□□□ 0.83
GREB1-205ENST00000389825 TGFB2P61812 414 aa20.23■□□□□ 0.83
GREB1-205ENST00000389825 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
GREB1-205ENST00000389825 ELL2O00472 640 aaPredicted RBP20.22■□□□□ 0.83
GREB1-205ENST00000389825 VAMP4O75379 141 aa20.22■□□□□ 0.83
GREB1-205ENST00000389825 ARHGAP27Q6ZUM4 889 aa20.22■□□□□ 0.83
GREB1-205ENST00000389825 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
GREB1-205ENST00000389825 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
GREB1-205ENST00000389825 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
GREB1-205ENST00000389825 KCNQ3O43525 872 aa20.21■□□□□ 0.83
GREB1-205ENST00000389825 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
GREB1-205ENST00000389825 ALDH1L2Q3SY69 923 aa20.2■□□□□ 0.82
GREB1-205ENST00000389825 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
GREB1-205ENST00000389825 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
GREB1-205ENST00000389825 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
GREB1-205ENST00000389825 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
GREB1-205ENST00000389825 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
GREB1-205ENST00000389825 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
GREB1-205ENST00000389825 MMP10P09238 476 aa20.18■□□□□ 0.82
GREB1-205ENST00000389825 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
GREB1-205ENST00000389825 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
GREB1-205ENST00000389825 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
GREB1-205ENST00000389825 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
GREB1-205ENST00000389825 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
GREB1-205ENST00000389825 HEG1Q9ULI3 1381 aa20.17■□□□□ 0.82
GREB1-205ENST00000389825 C10orf71Q711Q0 1435 aa20.17■□□□□ 0.82
GREB1-205ENST00000389825 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
GREB1-205ENST00000389825 PTCD1O75127 700 aaKnown RBP20.17■□□□□ 0.82
GREB1-205ENST00000389825 RARSP54136 660 aaKnown RBP20.17■□□□□ 0.82
GREB1-205ENST00000389825 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
GREB1-205ENST00000389825 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
GREB1-205ENST00000389825 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
GREB1-205ENST00000389825 BRCA1P38398 1863 aaKnown RBP20.17■□□□□ 0.82
GREB1-205ENST00000389825 HDGFL1Q5TGJ6 251 aa20.15■□□□□ 0.82
GREB1-205ENST00000389825 C9orf131Q5VYM1 1079 aa20.15■□□□□ 0.82
GREB1-205ENST00000389825 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
GREB1-205ENST00000389825 ARFGEF1Q9Y6D6 1849 aa20.15■□□□□ 0.82
GREB1-205ENST00000389825 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
GREB1-205ENST00000389825 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
GREB1-205ENST00000389825 KCPQ6ZWJ8 1503 aa20.14■□□□□ 0.81
GREB1-205ENST00000389825 CACNA1FO60840 1977 aa20.13■□□□□ 0.81
GREB1-205ENST00000389825 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms