RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
RPH3A-201ENST00000389385 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
RPH3A-201ENST00000389385 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
RPH3A-201ENST00000389385 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
RPH3A-201ENST00000389385 GSDMDP57764 484 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 TIGD1Q96MW7 591 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 FAM107BQ9H098 131 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 NSD2O96028 1365 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 FYB1O15117 783 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 IGHDP01880 384 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 KIF4BQ2VIQ3 1234 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
RPH3A-201ENST00000389385 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 MYL6BP14649 208 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 KIF5CO60282 957 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 KIF6Q6ZMV9 814 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 SHANK2Q9UPX8 1470 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 SIL1Q9H173 461 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
RPH3A-201ENST00000389385 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
RPH3A-201ENST00000389385 CAVIN2O95810 425 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPH3A-201ENST00000389385 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPH3A-201ENST00000389385 NEFHP12036 1026 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 ZNF165P49910 485 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 ZRSR2Q15696 482 aaKnown RBP13.36□□□□□ -0.27
RPH3A-201ENST00000389385 KIAA1328Q86T90 577 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 USHBP1Q8N6Y0 703 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
RPH3A-201ENST00000389385 CASQ1P31415 396 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 ACEP12821 1306 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
RPH3A-201ENST00000389385 MCM3P25205 808 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 HS1BP3Q53T59 392 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
RPH3A-201ENST00000389385 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
RPH3A-201ENST00000389385 TRIM27P14373 513 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 TAX1BP1Q86VP1 789 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 TESK2Q96S53 571 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 UBE2HP62256 183 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 PRPF40BQ6NWY9 871 aaKnown RBP13.35□□□□□ -0.27
RPH3A-201ENST00000389385 NUTM1Q86Y26 1132 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 INCENPQ9NQS7 918 aa13.35□□□□□ -0.27
RPH3A-201ENST00000389385 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 FBLN1P23142 703 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
RPH3A-201ENST00000389385 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 HSPA2P54652 639 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 STX6O43752 255 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
RPH3A-201ENST00000389385 SYCP1Q15431 976 aa13.34□□□□□ -0.27
RPH3A-201ENST00000389385 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
RPH3A-201ENST00000389385 C8orf34Q49A92 452 aa13.33□□□□□ -0.27
RPH3A-201ENST00000389385 CEP135Q66GS9 1140 aa13.33□□□□□ -0.27
RPH3A-201ENST00000389385 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.27
RPH3A-201ENST00000389385 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
RPH3A-201ENST00000389385 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
RPH3A-201ENST00000389385 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
RPH3A-201ENST00000389385 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
RPH3A-201ENST00000389385 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
RPH3A-201ENST00000389385 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.28
RPH3A-201ENST00000389385 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
RPH3A-201ENST00000389385 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
RPH3A-201ENST00000389385 TAF4BQ92750 862 aa13.33□□□□□ -0.28
RPH3A-201ENST00000389385 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
RPH3A-201ENST00000389385 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
RPH3A-201ENST00000389385 GOLGA6L9A6NEM1 432 aa13.32□□□□□ -0.28
RPH3A-201ENST00000389385 ENOX2Q16206 610 aaKnown RBP13.32□□□□□ -0.28
RPH3A-201ENST00000389385 PZPP20742 1482 aa13.32□□□□□ -0.28
RPH3A-201ENST00000389385 LMAN1P49257 510 aa13.32□□□□□ -0.28
RPH3A-201ENST00000389385 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
RPH3A-201ENST00000389385 SEPT7Q16181 437 aaKnown RBP13.31□□□□□ -0.28
RPH3A-201ENST00000389385 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 WASF1Q92558 559 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 SNX21Q969T3 373 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 STX1AQ16623 288 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
RPH3A-201ENST00000389385 MICALCLQ6ZW33 695 aa13.3□□□□□ -0.28
RPH3A-201ENST00000389385 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms