RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 POTEJP0CG39 1038 aa14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 ZNF830Q96NB3 372 aaPredicted RBP14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 SCLT1Q96NL6 688 aa14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 FBF1Q8TES7 1133 aa14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 LIMCH1Q9UPQ0 1083 aa14.34□□□□□ -0.11
SRGAP3-202ENST00000383836 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.11
SRGAP3-202ENST00000383836 GOLGA1Q92805 767 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 CEP83Q9Y592 693 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 ZSWIM4Q9H7M6 989 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 TIAM1Q13009 1591 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 A0A1B0GUA9 196 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 STX6O43752 255 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 NBPF11Q86T75 865 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 PAF1Q8N7H5 531 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 TSG101Q99816 390 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 VPS18Q9P253 973 aa14.33□□□□□ -0.12
SRGAP3-202ENST00000383836 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 ATP2C2O75185 946 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 SKILP12757 684 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 HOOK3Q86VS8 718 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 CNNM3Q8NE01 707 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 DNA2P51530 1060 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 MYH10P35580 1976 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 CCDC160A6NGH7 325 aa14.32□□□□□ -0.12
SRGAP3-202ENST00000383836 CTAGE9A4FU28 777 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 FSD2A1L4K1 749 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 ANAPC15P60006 121 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 SIL1Q9H173 461 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 CTAGE15A4D2H0 777 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 CTAGE8P0CG41 777 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 KIF5BP33176 963 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 NAA25Q14CX7 972 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 CTAGE6Q86UF2 777 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 CTAGE4Q8IX94 777 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 UBAC1Q9BSL1 405 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 MX1P20591 662 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 CPLX3Q8WVH0 158 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 GDPD2Q9HCC8 539 aa14.31□□□□□ -0.12
SRGAP3-202ENST00000383836 LRPPRCP42704 1394 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 SSBP05455 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 KIF4AO95239 1232 aa14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 DNAI1Q9UI46 699 aa14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-202ENST00000383836 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 DDX46Q7L014 1031 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 HDGFL1Q5TGJ6 251 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 STMN4Q9H169 189 aaPredicted RBP14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 CCDC114Q96M63 670 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 ANKRD50Q9ULJ7 1429 aa14.29□□□□□ -0.12
SRGAP3-202ENST00000383836 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 CTNNBL1Q8WYA6 563 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 DDX12PQ92771 950 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 ANO6Q4KMQ2 910 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 GJB2P29033 226 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 PRPF40BQ6NWY9 871 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 CNNM1Q9NRU3 951 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 SWAP70Q9UH65 585 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 C20orf194Q5TEA3 1177 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 FAM200AQ8TCP9 573 aa14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 GABPB1Q06547 395 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-202ENST00000383836 UBASH3AP57075 661 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 PSME1Q06323 249 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 FAM114A1Q8IWE2 563 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 A0A1W2PRG0 241 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 SETSIPP0DME0 302 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 HDXQ7Z353 690 aa14.27□□□□□ -0.12
SRGAP3-202ENST00000383836 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
SRGAP3-202ENST00000383836 NCOA2Q15596 1464 aa14.27□□□□□ -0.13
SRGAP3-202ENST00000383836 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.13
SRGAP3-202ENST00000383836 TBC1D9Q6ZT07 1266 aa14.27□□□□□ -0.13
SRGAP3-202ENST00000383836 SKAP1Q86WV1 359 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms