RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 C8orf34Q49A92 452 aa18.8■□□□□ 0.6
HCG27-201ENST00000383331 CDCA7Q9BWT1 371 aaPredicted RBP18.79■□□□□ 0.6
HCG27-201ENST00000383331 STK31Q9BXU1 1019 aa18.79■□□□□ 0.6
HCG27-201ENST00000383331 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
HCG27-201ENST00000383331 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
HCG27-201ENST00000383331 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
HCG27-201ENST00000383331 G2E3Q7L622 706 aa18.78■□□□□ 0.6
HCG27-201ENST00000383331 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.59
HCG27-201ENST00000383331 EN1Q05925 392 aaPredicted RBP18.76■□□□□ 0.59
HCG27-201ENST00000383331 C1orf115Q9H7X2 142 aa18.75■□□□□ 0.59
HCG27-201ENST00000383331 MSH5O43196 834 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
HCG27-201ENST00000383331 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 N4BP2Q86UW6 1770 aaPredicted RBP18.74■□□□□ 0.59
HCG27-201ENST00000383331 KCNQ3O43525 872 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 TRIM37O94972 964 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 CABP4P57796 275 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 FLIIQ13045 1269 aa18.74■□□□□ 0.59
HCG27-201ENST00000383331 CCT4P50991 539 aaKnown RBP18.73■□□□□ 0.59
HCG27-201ENST00000383331 GIGYF1O75420 1035 aaPredicted RBP18.72■□□□□ 0.59
HCG27-201ENST00000383331 NUCB1Q02818 461 aa18.72■□□□□ 0.59
HCG27-201ENST00000383331 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
HCG27-201ENST00000383331 TNS2Q63HR2 1409 aa18.72■□□□□ 0.59
HCG27-201ENST00000383331 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
HCG27-201ENST00000383331 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
HCG27-201ENST00000383331 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
HCG27-201ENST00000383331 F6X3S4 739 aa18.71■□□□□ 0.59
HCG27-201ENST00000383331 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
HCG27-201ENST00000383331 PXDNLA1KZ92 1463 aa18.7■□□□□ 0.58
HCG27-201ENST00000383331 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
HCG27-201ENST00000383331 EXOC5O00471 708 aa18.7■□□□□ 0.58
HCG27-201ENST00000383331 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
HCG27-201ENST00000383331 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
HCG27-201ENST00000383331 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
HCG27-201ENST00000383331 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
HCG27-201ENST00000383331 MEIS3Q99687 375 aa18.69■□□□□ 0.58
HCG27-201ENST00000383331 UBR2Q8IWV8 1755 aa18.69■□□□□ 0.58
HCG27-201ENST00000383331 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
HCG27-201ENST00000383331 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
HCG27-201ENST00000383331 DBF4Q9UBU7 674 aaPredicted RBP18.69■□□□□ 0.58
HCG27-201ENST00000383331 TOGARAM1Q9Y4F4 1720 aa18.68■□□□□ 0.58
HCG27-201ENST00000383331 APBA3O96018 575 aa18.68■□□□□ 0.58
HCG27-201ENST00000383331 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
HCG27-201ENST00000383331 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
HCG27-201ENST00000383331 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
HCG27-201ENST00000383331 FMNL2Q96PY5 1086 aa18.68■□□□□ 0.58
HCG27-201ENST00000383331 EIF2S2P20042 333 aaKnown RBP18.67■□□□□ 0.58
HCG27-201ENST00000383331 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
HCG27-201ENST00000383331 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
HCG27-201ENST00000383331 C5P01031 1676 aa18.66■□□□□ 0.58
HCG27-201ENST00000383331 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
HCG27-201ENST00000383331 SNRPA1P09661 255 aaKnown RBP18.66■□□□□ 0.58
HCG27-201ENST00000383331 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
HCG27-201ENST00000383331 CAMKK2Q96RR4 588 aa18.66■□□□□ 0.58
HCG27-201ENST00000383331 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
HCG27-201ENST00000383331 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
HCG27-201ENST00000383331 ITGB4P16144 1822 aa18.65■□□□□ 0.58
HCG27-201ENST00000383331 DDB1Q16531 1140 aa18.65■□□□□ 0.58
HCG27-201ENST00000383331 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
HCG27-201ENST00000383331 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
HCG27-201ENST00000383331 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
HCG27-201ENST00000383331 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
HCG27-201ENST00000383331 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
HCG27-201ENST00000383331 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
HCG27-201ENST00000383331 R3HDM1Q15032 1099 aaKnown RBP18.63■□□□□ 0.57
HCG27-201ENST00000383331 DDX21Q9NR30 783 aaKnown RBP eCLIP18.63■□□□□ 0.57
HCG27-201ENST00000383331 KCPQ6ZWJ8 1503 aa18.62■□□□□ 0.57
HCG27-201ENST00000383331 GNAI3P08754 354 aa18.62■□□□□ 0.57
HCG27-201ENST00000383331 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
HCG27-201ENST00000383331 GNAI2P04899 355 aa18.61■□□□□ 0.57
HCG27-201ENST00000383331 BCL9O00512 1426 aa18.6■□□□□ 0.57
HCG27-201ENST00000383331 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
HCG27-201ENST00000383331 DOT1LQ8TEK3 1739 aa18.59■□□□□ 0.57
HCG27-201ENST00000383331 HMMRO75330 724 aa18.58■□□□□ 0.57
HCG27-201ENST00000383331 SEC24BO95487 1268 aa18.58■□□□□ 0.57
HCG27-201ENST00000383331 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.57
HCG27-201ENST00000383331 DNAAF4Q8WXU2 420 aa18.58■□□□□ 0.57
HCG27-201ENST00000383331 USP44Q9H0E7 712 aa18.58■□□□□ 0.57
HCG27-201ENST00000383331 ADCY9O60503 1353 aa18.58■□□□□ 0.56
HCG27-201ENST00000383331 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
HCG27-201ENST00000383331 ANXA1P04083 346 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 PDIA6Q15084 440 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 MARCH10Q8NA82 808 aaPredicted RBP18.57■□□□□ 0.56
HCG27-201ENST00000383331 PIGBQ92521 554 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
HCG27-201ENST00000383331 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 LRP5O75197 1615 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 PI4KAP2A4QPH2 592 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 PROSER3Q2NL68 480 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 BEND3Q5T5X7 828 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 PI4KAP1Q8N8J0 262 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 SRCIN1Q9C0H9 1055 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
HCG27-201ENST00000383331 TEX13AQ9BXU3 409 aaPredicted RBP18.56■□□□□ 0.56
HCG27-201ENST00000383331 RREB1Q92766 1687 aa18.56■□□□□ 0.56
HCG27-201ENST00000383331 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms