RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 AK7Q96M32 723 aa15.37■□□□□ 0.05
APOBEC3F-202ENST00000381565 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
APOBEC3F-202ENST00000381565 FLAD1Q8NFF5 587 aa15.36■□□□□ 0.05
APOBEC3F-202ENST00000381565 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
APOBEC3F-202ENST00000381565 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
APOBEC3F-202ENST00000381565 MCM10Q7L590 875 aa15.35■□□□□ 0.05
APOBEC3F-202ENST00000381565 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
APOBEC3F-202ENST00000381565 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 GNPATO15228 680 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 PHF14O94880 888 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 SSFA2P28290 1259 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 TEFQ10587 303 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
APOBEC3F-202ENST00000381565 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
APOBEC3F-202ENST00000381565 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
APOBEC3F-202ENST00000381565 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
APOBEC3F-202ENST00000381565 RC3H1Q5TC82 1133 aaKnown RBP15.32■□□□□ 0.04
APOBEC3F-202ENST00000381565 DNAJC10Q8IXB1 793 aa15.32■□□□□ 0.04
APOBEC3F-202ENST00000381565 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3F-202ENST00000381565 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 CRKLP46109 303 aaKnown RBP15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 ZNF526Q8TF50 670 aaPredicted RBP15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 HEG1Q9ULI3 1381 aa15.31■□□□□ 0.04
APOBEC3F-202ENST00000381565 KCNQ3O43525 872 aa15.3■□□□□ 0.04
APOBEC3F-202ENST00000381565 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
APOBEC3F-202ENST00000381565 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
APOBEC3F-202ENST00000381565 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
APOBEC3F-202ENST00000381565 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 HSPA6P17066 643 aa15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
APOBEC3F-202ENST00000381565 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 KIF3CO14782 793 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 NEFMP07197 916 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 THUMPD2Q9BTF0 503 aaKnown RBP15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 N4BP2Q86UW6 1770 aaPredicted RBP15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
APOBEC3F-202ENST00000381565 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
APOBEC3F-202ENST00000381565 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
APOBEC3F-202ENST00000381565 ARHGEF1Q92888 912 aaKnown RBP15.27■□□□□ 0.04
APOBEC3F-202ENST00000381565 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
APOBEC3F-202ENST00000381565 TMPOP42166 694 aaKnown RBP15.26■□□□□ 0.03
APOBEC3F-202ENST00000381565 ZBTB1Q9Y2K1 713 aa15.26■□□□□ 0.03
APOBEC3F-202ENST00000381565 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3F-202ENST00000381565 COL15A1P39059 1388 aa15.25■□□□□ 0.03
APOBEC3F-202ENST00000381565 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
APOBEC3F-202ENST00000381565 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
APOBEC3F-202ENST00000381565 C10orf71Q711Q0 1435 aa15.25■□□□□ 0.03
APOBEC3F-202ENST00000381565 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 MMP10P09238 476 aa15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 GYS1P13807 737 aa15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 TAF7Q15545 349 aaPredicted RBP15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
APOBEC3F-202ENST00000381565 RIPK4P57078 832 aa15.23■□□□□ 0.03
APOBEC3F-202ENST00000381565 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
APOBEC3F-202ENST00000381565 DLEC1Q9Y238 1755 aa15.23■□□□□ 0.03
APOBEC3F-202ENST00000381565 ANKRD31Q8N7Z5 1873 aa15.23■□□□□ 0.03
APOBEC3F-202ENST00000381565 NUP98P52948 1817 aa15.22■□□□□ 0.03
APOBEC3F-202ENST00000381565 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
APOBEC3F-202ENST00000381565 RFC4P35249 363 aa15.21■□□□□ 0.03
APOBEC3F-202ENST00000381565 A0A0G2JLW4 131 aa15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 ANP32CO43423 234 aa15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 STARD3NLO95772 234 aa15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 TEX13AQ9BXU3 409 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
APOBEC3F-202ENST00000381565 A1BGP04217 495 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 FKBP8Q14318 412 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 BCL2L12Q9HB09 334 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 ARFGEF1Q9Y6D6 1849 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
APOBEC3F-202ENST00000381565 COL11A2P13942 1736 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 SNRPA1P09661 255 aaKnown RBP15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 TGFB2P61812 414 aa15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
APOBEC3F-202ENST00000381565 DPEP1P16444 411 aa15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 KCNA3P22001 575 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms