RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
SGCB-201ENST00000381431 CAGE1Q8TC20 777 aa20.15■□□□□ 0.82
SGCB-201ENST00000381431 GJB2P29033 226 aa20.15■□□□□ 0.82
SGCB-201ENST00000381431 CCDC43Q96MW1 224 aaKnown RBP20.15■□□□□ 0.82
SGCB-201ENST00000381431 CDKL5O76039 1030 aa20.14■□□□□ 0.81
SGCB-201ENST00000381431 NECAB1Q8N987 351 aa20.14■□□□□ 0.81
SGCB-201ENST00000381431 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.81
SGCB-201ENST00000381431 EVI5LQ96CN4 794 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 POGZQ7Z3K3 1410 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 GOLIM4O00461 696 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 PDIA4P13667 645 aaKnown RBP20.13■□□□□ 0.81
SGCB-201ENST00000381431 PPFIBP1Q86W92 1011 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 RUFY1Q96T51 708 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 STARD3NLO95772 234 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 EPS15P42566 896 aa20.13■□□□□ 0.81
SGCB-201ENST00000381431 HCLS1P14317 486 aaPredicted RBP20.12■□□□□ 0.81
SGCB-201ENST00000381431 PIK3C2GO75747 1445 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 SMARCE1Q969G3 411 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 GPTP24298 496 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 CDK5RAP3Q96JB5 506 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
SGCB-201ENST00000381431 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
SGCB-201ENST00000381431 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 HAND2P61296 217 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 RAB11FIP4Q86YS3 637 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 MAGEC2Q9UBF1 373 aaPredicted RBP20.11■□□□□ 0.81
SGCB-201ENST00000381431 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
SGCB-201ENST00000381431 ESYT1Q9BSJ8 1104 aa20.11■□□□□ 0.81
SGCB-201ENST00000381431 ZSCAN23Q3MJ62 389 aa20.1■□□□□ 0.81
SGCB-201ENST00000381431 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
SGCB-201ENST00000381431 GIMAP6Q6P9H5 292 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 DDX46Q7L014 1031 aaKnown RBP20.09■□□□□ 0.81
SGCB-201ENST00000381431 AKAP2Q9Y2D5 859 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 A2MP01023 1474 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 CCP110O43303 1012 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 ACBD3Q9H3P7 528 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 TMOD3Q9NYL9 352 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 CEP85Q6P2H3 762 aa20.09■□□□□ 0.81
SGCB-201ENST00000381431 ZGPATQ8N5A5 531 aaKnown RBP20.09■□□□□ 0.81
SGCB-201ENST00000381431 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
SGCB-201ENST00000381431 NAPBQ9H115 298 aa20.08■□□□□ 0.81
SGCB-201ENST00000381431 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
SGCB-201ENST00000381431 PA2G4Q9UQ80 394 aaKnown RBP20.08■□□□□ 0.81
SGCB-201ENST00000381431 WDR62O43379 1518 aa20.08■□□□□ 0.8
SGCB-201ENST00000381431 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.8
SGCB-201ENST00000381431 ATP8B2P98198 1209 aa20.08■□□□□ 0.8
SGCB-201ENST00000381431 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.8
SGCB-201ENST00000381431 ANKRD24Q8TF21 1146 aa20.08■□□□□ 0.8
SGCB-201ENST00000381431 ZHX3Q9H4I2 956 aa20.08■□□□□ 0.8
SGCB-201ENST00000381431 BIN1O00499 593 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 RRP9O43818 475 aaKnown RBP20.07■□□□□ 0.8
SGCB-201ENST00000381431 ADCY5O95622 1261 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 SKIDA1Q1XH10 827 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 SNX21Q969T3 373 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 PPIP5K1Q6PFW1 1433 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 KLHL10Q6JEL2 608 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 NOL7Q9UMY1 257 aaKnown RBP20.07■□□□□ 0.8
SGCB-201ENST00000381431 ZNF213O14771 459 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 SFPQP23246 707 aaKnown RBP eCLIP20.07■□□□□ 0.8
SGCB-201ENST00000381431 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
SGCB-201ENST00000381431 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
SGCB-201ENST00000381431 OTUD7AQ8TE49 926 aaPredicted RBP20.06■□□□□ 0.8
SGCB-201ENST00000381431 DACH1Q9UI36 760 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 ANKRD13DQ6ZTN6 518 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 FSIP1Q8NA03 581 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 BRF1Q92994 677 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 ANO10Q9NW15 660 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 COL17A1Q9UMD9 1497 aaPredicted RBP20.06■□□□□ 0.8
SGCB-201ENST00000381431 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
SGCB-201ENST00000381431 KRT18P05783 430 aaKnown RBP20.06■□□□□ 0.8
SGCB-201ENST00000381431 ZNF165P49910 485 aa20.06■□□□□ 0.8
SGCB-201ENST00000381431 ASXL2Q76L83 1435 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 PATL2C9JE40 543 aaKnown RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 CCAR1Q8IX12 1150 aaKnown RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 NEK1Q96PY6 1258 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 TRMT1Q9NXH9 659 aaKnown RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 SSBP05455 408 aaKnown RBP eCLIP20.05■□□□□ 0.8
SGCB-201ENST00000381431 C16orf45Q96MC5 204 aaPredicted RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 CBFA2T2O43439 604 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
SGCB-201ENST00000381431 LDHAL6AQ6ZMR3 332 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 AK7Q96M32 723 aa20.05■□□□□ 0.8
SGCB-201ENST00000381431 SMTNL1A8MU46 457 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 UBE2HP62256 183 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 IFNL2Q8IZJ0 200 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 XAGE3Q8WTP9 111 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 CLIP2Q9UDT6 1046 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms