RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NUCB2P80303 420 aa13.27□□□□□ -0.29
DNMT3A-203ENST00000380746 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
DNMT3A-203ENST00000380746 FERMT3Q86UX7 667 aa13.27□□□□□ -0.29
DNMT3A-203ENST00000380746 MYD88Q99836 296 aa13.27□□□□□ -0.29
DNMT3A-203ENST00000380746 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 FSD1Q9BTV5 496 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 FAM177BA6PVY3 158 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 SNX21Q969T3 373 aa13.26□□□□□ -0.29
DNMT3A-203ENST00000380746 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 CHMLP26374 656 aa13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 JAKMIP1Q96N16 626 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-203ENST00000380746 IFT172Q9UG01 1749 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 DNTTIP2Q5QJE6 756 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 CCDC83Q8IWF9 413 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 DHX37Q8IY37 1157 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 NECAB1Q8N987 351 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 IP6K1Q92551 441 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 GPATCH3Q96I76 525 aa13.24□□□□□ -0.29
DNMT3A-203ENST00000380746 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 MSNP26038 577 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 SKOR2Q2VWA4 1001 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 SMC3Q9UQE7 1217 aa13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 ADAMTS13Q76LX8 1427 aa13.23□□□□□ -0.29
DNMT3A-203ENST00000380746 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 IL25Q9H293 177 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 KCNH5Q8NCM2 988 aa13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-203ENST00000380746 GORABQ5T7V8 394 aa13.21□□□□□ -0.29
DNMT3A-203ENST00000380746 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
DNMT3A-203ENST00000380746 EVA1CP58658 441 aa13.21□□□□□ -0.29
DNMT3A-203ENST00000380746 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
DNMT3A-203ENST00000380746 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
DNMT3A-203ENST00000380746 RICTORQ6R327 1708 aa13.21□□□□□ -0.3
DNMT3A-203ENST00000380746 CABP4P57796 275 aa13.21□□□□□ -0.3
DNMT3A-203ENST00000380746 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.3
DNMT3A-203ENST00000380746 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
DNMT3A-203ENST00000380746 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-203ENST00000380746 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
DNMT3A-203ENST00000380746 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-203ENST00000380746 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 PRDM11Q9NQV5 511 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 FAM173BQ6P4H8 233 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
DNMT3A-203ENST00000380746 MED14O60244 1454 aa13.18□□□□□ -0.3
DNMT3A-203ENST00000380746 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
DNMT3A-203ENST00000380746 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
DNMT3A-203ENST00000380746 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
DNMT3A-203ENST00000380746 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
DNMT3A-203ENST00000380746 A0A087WZG4 1122 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 ESPNB1AK53 854 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 CRB1P82279 1406 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 CHGBP05060 677 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-203ENST00000380746 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 ADGRB2O60241 1585 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 DIP2BQ9P265 1576 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 AK2P54819 239 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms