RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 ZBTB1Q9Y2K1 713 aa23.59■■□□□ 1.37
CDKN1C-201ENST00000380725 CHD4Q14839 1912 aa23.59■■□□□ 1.37
CDKN1C-201ENST00000380725 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
CDKN1C-201ENST00000380725 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
CDKN1C-201ENST00000380725 ZPR1O75312 459 aa23.58■■□□□ 1.37
CDKN1C-201ENST00000380725 FKBP8Q14318 412 aa23.57■■□□□ 1.36
CDKN1C-201ENST00000380725 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
CDKN1C-201ENST00000380725 NFE2L2Q16236 605 aa23.57■■□□□ 1.36
CDKN1C-201ENST00000380725 PARP3Q9Y6F1 533 aa23.57■■□□□ 1.36
CDKN1C-201ENST00000380725 USPL1Q5W0Q7 1092 aa23.56■■□□□ 1.36
CDKN1C-201ENST00000380725 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
CDKN1C-201ENST00000380725 NARFQ9UHQ1 456 aa23.55■■□□□ 1.36
CDKN1C-201ENST00000380725 COL15A1P39059 1388 aa23.53■■□□□ 1.36
CDKN1C-201ENST00000380725 GRIN3BO60391 1043 aa23.53■■□□□ 1.36
CDKN1C-201ENST00000380725 YBX3P16989 372 aaKnown RBP eCLIP23.53■■□□□ 1.36
CDKN1C-201ENST00000380725 EIF5P55010 431 aaKnown RBP23.53■■□□□ 1.36
CDKN1C-201ENST00000380725 MIS18AQ9NYP9 233 aa23.53■■□□□ 1.36
CDKN1C-201ENST00000380725 A1BGP04217 495 aa23.52■■□□□ 1.36
CDKN1C-201ENST00000380725 USP16Q9Y5T5 823 aa23.52■■□□□ 1.36
CDKN1C-201ENST00000380725 A0A087WZG4 1122 aa23.51■■□□□ 1.35
CDKN1C-201ENST00000380725 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
CDKN1C-201ENST00000380725 TM4SF1P30408 202 aa23.51■■□□□ 1.35
CDKN1C-201ENST00000380725 RIPK4P57078 832 aa23.5■■□□□ 1.35
CDKN1C-201ENST00000380725 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
CDKN1C-201ENST00000380725 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
CDKN1C-201ENST00000380725 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
CDKN1C-201ENST00000380725 ZNF330Q9Y3S2 320 aaPredicted RBP23.5■■□□□ 1.35
CDKN1C-201ENST00000380725 KIF13BQ9NQT8 1826 aa23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 IL6STP40189 918 aaPredicted RBP23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 TGFB2P61812 414 aa23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 DDR1Q08345 913 aa23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 NPM2Q86SE8 214 aaKnown RBP23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 WWC3Q9ULE0 1092 aa23.49■■□□□ 1.35
CDKN1C-201ENST00000380725 PRAMEF22A3QJZ6 481 aa23.48■■□□□ 1.35
CDKN1C-201ENST00000380725 BCL2L12Q9HB09 334 aa23.48■■□□□ 1.35
CDKN1C-201ENST00000380725 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 ADAMTS8Q9UP79 889 aa23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 TBC1D2BQ9UPU7 963 aa23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
CDKN1C-201ENST00000380725 A0A0G2JLW4 131 aa23.46■■□□□ 1.35
CDKN1C-201ENST00000380725 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
CDKN1C-201ENST00000380725 NFIXQ14938 502 aa23.46■■□□□ 1.35
CDKN1C-201ENST00000380725 UTRNP46939 3433 aa23.45■■□□□ 1.34
CDKN1C-201ENST00000380725 C10orf71Q711Q0 1435 aa23.45■■□□□ 1.34
CDKN1C-201ENST00000380725 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
CDKN1C-201ENST00000380725 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
CDKN1C-201ENST00000380725 RUNDC1Q96C34 613 aa23.44■■□□□ 1.34
CDKN1C-201ENST00000380725 DPEP1P16444 411 aa23.43■■□□□ 1.34
CDKN1C-201ENST00000380725 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
CDKN1C-201ENST00000380725 PXDNLA1KZ92 1463 aa23.43■■□□□ 1.34
CDKN1C-201ENST00000380725 KDM3BQ7LBC6 1761 aa23.42■■□□□ 1.34
CDKN1C-201ENST00000380725 LMOD3Q0VAK6 560 aa23.42■■□□□ 1.34
CDKN1C-201ENST00000380725 BICDL1Q6ZP65 573 aa23.42■■□□□ 1.34
CDKN1C-201ENST00000380725 AFDNP55196 1824 aaKnown RBP23.42■■□□□ 1.34
CDKN1C-201ENST00000380725 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
CDKN1C-201ENST00000380725 SERPINB2P05120 415 aa23.41■■□□□ 1.34
CDKN1C-201ENST00000380725 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
CDKN1C-201ENST00000380725 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
CDKN1C-201ENST00000380725 GIGYF1O75420 1035 aaPredicted RBP23.4■■□□□ 1.34
CDKN1C-201ENST00000380725 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-201ENST00000380725 NBPF26B4DH59 902 aa23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 TBC1D9BQ66K14 1250 aa23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 NBPF15Q8N660 670 aa23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 ZNF784Q8NCA9 323 aaPredicted RBP23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
CDKN1C-201ENST00000380725 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
CDKN1C-201ENST00000380725 KCNA3P22001 575 aa23.38■■□□□ 1.33
CDKN1C-201ENST00000380725 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
CDKN1C-201ENST00000380725 PIM2Q9P1W9 311 aa23.37■■□□□ 1.33
CDKN1C-201ENST00000380725 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
CDKN1C-201ENST00000380725 CHRNA5P30532 468 aa23.35■■□□□ 1.33
CDKN1C-201ENST00000380725 SETDB2Q96T68 719 aa23.35■■□□□ 1.33
CDKN1C-201ENST00000380725 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
CDKN1C-201ENST00000380725 NRXN2Q9P2S2 1712 aa23.35■■□□□ 1.33
CDKN1C-201ENST00000380725 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
CDKN1C-201ENST00000380725 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
CDKN1C-201ENST00000380725 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
CDKN1C-201ENST00000380725 CLEC4GQ6UXB4 293 aa23.33■■□□□ 1.33
CDKN1C-201ENST00000380725 DALRD3Q5D0E6 543 aaKnown RBP23.32■■□□□ 1.32
CDKN1C-201ENST00000380725 NGEFQ8N5V2 710 aa23.32■■□□□ 1.32
CDKN1C-201ENST00000380725 CCDC184Q52MB2 194 aa23.31■■□□□ 1.32
CDKN1C-201ENST00000380725 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
CDKN1C-201ENST00000380725 ZNF652Q9Y2D9 606 aa23.31■■□□□ 1.32
CDKN1C-201ENST00000380725 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
CDKN1C-201ENST00000380725 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
CDKN1C-201ENST00000380725 CARMIL3Q8ND23 1372 aa23.3■■□□□ 1.32
CDKN1C-201ENST00000380725 CHL1O00533 1208 aa23.3■■□□□ 1.32
CDKN1C-201ENST00000380725 APAF1O14727 1248 aa23.3■■□□□ 1.32
CDKN1C-201ENST00000380725 ANP32CO43423 234 aa23.3■■□□□ 1.32
CDKN1C-201ENST00000380725 MYL6BP14649 208 aa23.29■■□□□ 1.32
CDKN1C-201ENST00000380725 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
CDKN1C-201ENST00000380725 ARFGEF1Q9Y6D6 1849 aa23.29■■□□□ 1.32
CDKN1C-201ENST00000380725 H0YIN7 160 aa23.28■■□□□ 1.32
CDKN1C-201ENST00000380725 NPHP1O15259 732 aa23.28■■□□□ 1.32
CDKN1C-201ENST00000380725 EIF2S2P20042 333 aaKnown RBP23.28■■□□□ 1.32
CDKN1C-201ENST00000380725 C2CD5Q86YS7 1000 aa23.28■■□□□ 1.32
CDKN1C-201ENST00000380725 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms