RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ZNF213O14771 459 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 KIF18AQ8NI77 898 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 CCDC102AQ96A19 550 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
COL2A1-202ENST00000380518 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
COL2A1-202ENST00000380518 PPP1R12BO60237 982 aaPredicted RBP18.68■□□□□ 0.58
COL2A1-202ENST00000380518 MPRIPQ6WCQ1 1025 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 TTC21BQ7Z4L5 1316 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
COL2A1-202ENST00000380518 TMCO3Q6UWJ1 677 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 KRI1Q8N9T8 703 aaKnown RBP18.67■□□□□ 0.58
COL2A1-202ENST00000380518 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-202ENST00000380518 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 IL16Q14005 1332 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 A0A087WZG4 1122 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 FAM193AP78312 1265 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 TAX1BP1Q86VP1 789 aa18.67■□□□□ 0.58
COL2A1-202ENST00000380518 RPRD2Q5VT52 1461 aaKnown RBP18.67■□□□□ 0.58
COL2A1-202ENST00000380518 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-202ENST00000380518 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
COL2A1-202ENST00000380518 SF3B2Q13435 895 aaKnown RBP18.66■□□□□ 0.58
COL2A1-202ENST00000380518 SPA17Q15506 151 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 KLHL10Q6JEL2 608 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-202ENST00000380518 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 IDI1Q13907 227 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 FKBP15Q5T1M5 1219 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 JAKMIP3Q5VZ66 844 aa18.66■□□□□ 0.58
COL2A1-202ENST00000380518 GUCY1B3Q02153 619 aa18.65■□□□□ 0.58
COL2A1-202ENST00000380518 ENOX2Q16206 610 aaKnown RBP18.65■□□□□ 0.58
COL2A1-202ENST00000380518 SLC5A1P13866 664 aa18.65■□□□□ 0.58
COL2A1-202ENST00000380518 CRACR2AQ9BSW2 395 aa18.65■□□□□ 0.58
COL2A1-202ENST00000380518 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
COL2A1-202ENST00000380518 KIF5CO60282 957 aa18.65■□□□□ 0.58
COL2A1-202ENST00000380518 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.58
COL2A1-202ENST00000380518 RAB34Q9BZG1 259 aa18.64■□□□□ 0.58
COL2A1-202ENST00000380518 TRMT112Q9UI30 125 aaKnown RBP18.64■□□□□ 0.58
COL2A1-202ENST00000380518 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.58
COL2A1-202ENST00000380518 ANKRD62A6NC57 917 aa18.64■□□□□ 0.57
COL2A1-202ENST00000380518 PLB1Q6P1J6 1458 aa18.64■□□□□ 0.57
COL2A1-202ENST00000380518 USP25Q9UHP3 1055 aa18.64■□□□□ 0.57
COL2A1-202ENST00000380518 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
COL2A1-202ENST00000380518 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
COL2A1-202ENST00000380518 NEMFO60524 1076 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 IFIT3O14879 490 aaKnown RBP18.63■□□□□ 0.57
COL2A1-202ENST00000380518 STX6O43752 255 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 DZIP1Q86YF9 867 aaKnown RBP18.63■□□□□ 0.57
COL2A1-202ENST00000380518 GOLGA8AA7E2F4 631 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 DESP17661 470 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 FSIP1Q8NA03 581 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 FOXO3O43524 673 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 CALRP27797 417 aaKnown RBP18.63■□□□□ 0.57
COL2A1-202ENST00000380518 TSG101Q99816 390 aa18.63■□□□□ 0.57
COL2A1-202ENST00000380518 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
COL2A1-202ENST00000380518 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
COL2A1-202ENST00000380518 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 FAM135AQ9P2D6 1515 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 URI1O94763 535 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-202ENST00000380518 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
COL2A1-202ENST00000380518 KIF4BQ2VIQ3 1234 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 MBIPQ9NS73 344 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 ZPR1O75312 459 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 CETN2P41208 172 aa18.62■□□□□ 0.57
COL2A1-202ENST00000380518 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
COL2A1-202ENST00000380518 TTC22Q5TAA0 569 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 CACNA2D4Q7Z3S7 1137 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 CRACR2BQ8N4Y2 399 aaPredicted RBP18.61■□□□□ 0.57
COL2A1-202ENST00000380518 GJB2P29033 226 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 ZNF444Q8N0Y2 327 aaPredicted RBP18.61■□□□□ 0.57
COL2A1-202ENST00000380518 ARHGAP45Q92619 1136 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 CCDC194A0A1B0GVG4 234 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 POTEJP0CG39 1038 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 TNIP1Q15025 636 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
COL2A1-202ENST00000380518 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
COL2A1-202ENST00000380518 KIF14Q15058 1648 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
COL2A1-202ENST00000380518 PPP1R42Q7Z4L9 355 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 EZRP15311 586 aaKnown RBP18.6■□□□□ 0.57
COL2A1-202ENST00000380518 GSDMDP57764 484 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 HMG20BQ9P0W2 317 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 IGHDP01880 384 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 USP8P40818 1118 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 MAP9Q49MG5 647 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 TFIP11Q9UBB9 837 aaKnown RBP18.6■□□□□ 0.57
COL2A1-202ENST00000380518 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 NOS1P29475 1434 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 KIF20AO95235 890 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms