RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
PMS2-202ENST00000380416 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
PMS2-202ENST00000380416 TNNT2P45379 298 aaPredicted RBP11.93□□□□□ -0.5
PMS2-202ENST00000380416 TGFB2P61812 414 aa11.93□□□□□ -0.5
PMS2-202ENST00000380416 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
PMS2-202ENST00000380416 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
PMS2-202ENST00000380416 KNSTRNQ9Y448 316 aa11.93□□□□□ -0.5
PMS2-202ENST00000380416 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
PMS2-202ENST00000380416 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
PMS2-202ENST00000380416 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
PMS2-202ENST00000380416 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
PMS2-202ENST00000380416 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
PMS2-202ENST00000380416 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
PMS2-202ENST00000380416 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
PMS2-202ENST00000380416 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
PMS2-202ENST00000380416 MORC1Q86VD1 984 aa11.9□□□□□ -0.5
PMS2-202ENST00000380416 RNF181Q9P0P0 153 aa11.9□□□□□ -0.5
PMS2-202ENST00000380416 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
PMS2-202ENST00000380416 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
PMS2-202ENST00000380416 A0A0G2JLW4 131 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 FCHSD2O94868 740 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 LBX1P52954 281 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 PDE4DIPQ5VU43 2346 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
PMS2-202ENST00000380416 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
PMS2-202ENST00000380416 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
PMS2-202ENST00000380416 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
PMS2-202ENST00000380416 AIDAQ96BJ3 306 aa11.88□□□□□ -0.51
PMS2-202ENST00000380416 AK7Q96M32 723 aa11.88□□□□□ -0.51
PMS2-202ENST00000380416 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
PMS2-202ENST00000380416 TIAM2Q8IVF5 1701 aa11.88□□□□□ -0.51
PMS2-202ENST00000380416 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
PMS2-202ENST00000380416 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
PMS2-202ENST00000380416 PHF14O94880 888 aa11.87□□□□□ -0.51
PMS2-202ENST00000380416 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
PMS2-202ENST00000380416 SSFA2P28290 1259 aa11.87□□□□□ -0.51
PMS2-202ENST00000380416 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
PMS2-202ENST00000380416 CCDC85CA6NKD9 419 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 MMP10P09238 476 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 DPEP1P16444 411 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
PMS2-202ENST00000380416 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 EYA1Q99502 592 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
PMS2-202ENST00000380416 HSPA8P11142 646 aaKnown RBP11.85□□□□□ -0.51
PMS2-202ENST00000380416 KCNA3P22001 575 aa11.85□□□□□ -0.51
PMS2-202ENST00000380416 SPG7Q9UQ90 795 aa11.85□□□□□ -0.51
PMS2-202ENST00000380416 ITGB4P16144 1822 aa11.84□□□□□ -0.51
PMS2-202ENST00000380416 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
PMS2-202ENST00000380416 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
PMS2-202ENST00000380416 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
PMS2-202ENST00000380416 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
PMS2-202ENST00000380416 CYP27B1O15528 508 aa11.82□□□□□ -0.52
PMS2-202ENST00000380416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
PMS2-202ENST00000380416 POTECB2RU33 542 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
PMS2-202ENST00000380416 VEGFBP49765 207 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
PMS2-202ENST00000380416 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
PMS2-202ENST00000380416 MPRIPQ6WCQ1 1025 aa11.8□□□□□ -0.52
PMS2-202ENST00000380416 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
PMS2-202ENST00000380416 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
PMS2-202ENST00000380416 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
PMS2-202ENST00000380416 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
PMS2-202ENST00000380416 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
PMS2-202ENST00000380416 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
PMS2-202ENST00000380416 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
PMS2-202ENST00000380416 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
PMS2-202ENST00000380416 LINC00116Q8NCU8 138 aa11.79□□□□□ -0.52
PMS2-202ENST00000380416 PYGBP11216 843 aa11.78□□□□□ -0.52
PMS2-202ENST00000380416 PHKG2P15735 406 aa11.78□□□□□ -0.52
PMS2-202ENST00000380416 MTHFSP49914 203 aa11.78□□□□□ -0.52
PMS2-202ENST00000380416 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
PMS2-202ENST00000380416 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
PMS2-202ENST00000380416 PASKQ96RG2 1323 aa11.78□□□□□ -0.52
PMS2-202ENST00000380416 GNPATO15228 680 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
PMS2-202ENST00000380416 IL13P35225 146 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 RASSF7Q02833 373 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
PMS2-202ENST00000380416 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 KDRP35968 1356 aa11.77□□□□□ -0.53
PMS2-202ENST00000380416 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
PMS2-202ENST00000380416 LMNB1P20700 586 aa11.76□□□□□ -0.53
PMS2-202ENST00000380416 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
PMS2-202ENST00000380416 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
PMS2-202ENST00000380416 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
PMS2-202ENST00000380416 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
PMS2-202ENST00000380416 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
PMS2-202ENST00000380416 PIGBQ92521 554 aa11.75□□□□□ -0.53
PMS2-202ENST00000380416 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms