RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 PLA2G4AP47712 749 aa11.18□□□□□ -0.62
CTPS2-202ENST00000380241 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
CTPS2-202ENST00000380241 AK7Q96M32 723 aa11.18□□□□□ -0.62
CTPS2-202ENST00000380241 ABCC4O15439 1325 aa11.18□□□□□ -0.62
CTPS2-202ENST00000380241 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 A0A1B0GUL7 405 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 F13A1P00488 732 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 PLA2G4DQ86XP0 818 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 ERCC6LQ2NKX8 1250 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
CTPS2-202ENST00000380241 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 CBX8Q9HC52 389 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 ANO2Q9NQ90 1003 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 MRVI1Q9Y6F6 885 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 PTPRTO14522 1441 aa11.17□□□□□ -0.62
CTPS2-202ENST00000380241 GYS2P54840 703 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 SKILP12757 684 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 JRKLQ9Y4A0 524 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 ELP1O95163 1332 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 RAD50Q92878 1312 aa11.16□□□□□ -0.62
CTPS2-202ENST00000380241 MLECQ14165 292 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 SRLQ86TD4 932 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 LRRC8AQ8IWT6 810 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 GOLGA5Q8TBA6 731 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 ESYT1Q9BSJ8 1104 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 DEF6Q9H4E7 631 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 PALD1Q9ULE6 856 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 RRP15Q9Y3B9 282 aaKnown RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TCHHQ07283 1943 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 SYT1P21579 422 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 RPAP2Q8IXW5 612 aaPredicted RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TOMM22Q9NS69 142 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TRMT1Q9NXH9 659 aaKnown RBP11.15□□□□□ -0.62
CTPS2-202ENST00000380241 USP27XA6NNY8 438 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 CDC25BP30305 580 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 TNMDQ9H2S6 317 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 ERCC6L2Q5T890 1561 aa11.15□□□□□ -0.62
CTPS2-202ENST00000380241 GPATCH11Q8N954 259 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 NFATC2IPQ8NCF5 419 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 FBXO18Q8NFZ0 1043 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 LCMT1Q9UIC8 334 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 ERBB3P21860 1342 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 ATP8B1O43520 1251 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 VAMP4O75379 141 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 ST5P78524 1137 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 CAMK4Q16566 473 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 HMGB1P09429 215 aaKnown RBP11.14□□□□□ -0.63
CTPS2-202ENST00000380241 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
CTPS2-202ENST00000380241 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 UBXN4Q92575 508 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 SBNO2Q9Y2G9 1366 aa11.14□□□□□ -0.63
CTPS2-202ENST00000380241 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 CCAR2Q8N163 923 aaKnown RBP11.13□□□□□ -0.63
CTPS2-202ENST00000380241 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 NSD2O96028 1365 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 GOLGA6L4A6NEF3 574 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 ZNF165P49910 485 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 BANK1Q8NDB2 785 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 DRC1Q96MC2 740 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 OAS2P29728 719 aaKnown RBP11.13□□□□□ -0.63
CTPS2-202ENST00000380241 SNW1Q13573 536 aaKnown RBP11.13□□□□□ -0.63
CTPS2-202ENST00000380241 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTPS2-202ENST00000380241 L2HGDHQ9H9P8 463 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
CTPS2-202ENST00000380241 ZRANB2O95218 330 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTPS2-202ENST00000380241 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 CAVIN2O95810 425 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 IVLP07476 585 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 SPHKAPQ2M3C7 1700 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 ELL2O00472 640 aaPredicted RBP11.12□□□□□ -0.63
CTPS2-202ENST00000380241 TPM1P09493 284 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 CASTP20810 708 aaKnown RBP11.12□□□□□ -0.63
CTPS2-202ENST00000380241 LMAN1P49257 510 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 PDE1AP54750 535 aa11.12□□□□□ -0.63
CTPS2-202ENST00000380241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTPS2-202ENST00000380241 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
CTPS2-202ENST00000380241 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
CTPS2-202ENST00000380241 MAGEA9P43362 315 aa11.11□□□□□ -0.63
CTPS2-202ENST00000380241 MNS1Q8NEH6 495 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms