RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 KIAA1328Q86T90 577 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 NUP133Q8WUM0 1156 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 SNAPC4Q5SXM2 1469 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC57Q2TAC2 916 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 NOL7Q9UMY1 257 aaKnown RBP4.89□□□□□ -1.63
BRCA2-201ENST00000380152 TMC6Q7Z403 805 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 TANGO6Q9C0B7 1094 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 DNMT1P26358 1616 aaKnown RBP4.89□□□□□ -1.63
BRCA2-201ENST00000380152 TRIM22Q8IYM9 498 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 DACT1Q9NYF0 836 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 RAI14Q9P0K7 980 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 LAMC3Q9Y6N6 1575 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 RTEL1-TNFRSF6BF6WH68 1400 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC186Q7Z3E2 898 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 CCAR1Q8IX12 1150 aaKnown RBP4.89□□□□□ -1.63
BRCA2-201ENST00000380152 KIF2AO00139 706 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-201ENST00000380152 SMC5Q8IY18 1101 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 KRT222Q8N1A0 295 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 NECAB1Q8N987 351 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 CPLX3Q8WVH0 158 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 PER1O15534 1290 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 BMS1Q14692 1282 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 C8orf76Q96K31 380 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 MYO6Q9UM54 1294 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 USP8P40818 1118 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 GSDMDP57764 484 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 ARFGAP3Q9NP61 516 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 KIF1BO60333 1816 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 UVSSAQ2YD98 709 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 TCEAL9Q9UHQ7 104 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CALRP27797 417 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 MCM6Q14566 821 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 ESCO1Q5FWF5 840 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 ZNF397Q8NF99 534 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CDK5RAP3Q96JB5 506 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 RBSNQ9H1K0 784 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 ABCA10Q8WWZ4 1543 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CTAGE5O15320 804 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 UBASH3AP57075 661 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 TAX1BP1Q86VP1 789 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 MBIPQ9NS73 344 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 TAF7Q15545 349 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC144CPQ8IYA2 1237 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC148Q8NFR7 591 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 DDX19AQ9NUU7 478 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 SAMD1Q6SPF0 538 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 NUP88Q99567 741 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 SKILP12757 684 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 PTGS1P23219 599 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 IQCEQ6IPM2 695 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 U3KPZ7 1027 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 ZNF213O14771 459 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 RBM25P49756 843 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 FLIIQ13045 1269 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 IPO4Q8TEX9 1081 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 JAKMIP3Q5VZ66 844 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 GTPBP4Q9BZE4 634 aaKnown RBP4.88□□□□□ -1.63
BRCA2-201ENST00000380152 FBXO3Q9UK99 471 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 EMILIN1Q9Y6C2 1016 aa4.88□□□□□ -1.63
BRCA2-201ENST00000380152 CDKL5O76039 1030 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 IBSPP21815 317 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PDE1AP54750 535 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 LUZP1Q86V48 1076 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PIBF1Q8WXW3 757 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 EVI5LQ96CN4 794 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 NUDT16Q96DE0 195 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 RNF123Q5XPI4 1314 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PRAG1Q86YV5 1406 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 SHTN1A0MZ66 631 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 ESYT1Q9BSJ8 1104 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 ZSCAN16Q9H4T2 348 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PRM3Q9NNZ6 103 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 JADE2Q9NQC1 790 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 BCCIPQ9P287 314 aaKnown RBP eCLIP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 TCHHQ07283 1943 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 DNAJC25Q9H1X3 360 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 SH2B1Q9NRF2 756 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 ATAD2Q6PL18 1390 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 RAPGEF3O95398 923 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 SLC3A2P08195 630 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 STIM1Q13586 685 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 ZBTB40Q9NUA8 1239 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PBRM1Q86U86 1689 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 HMGB1P09429 215 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 ENOX2Q16206 610 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 IMMTQ16891 758 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 KIF6Q6ZMV9 814 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 PLCD3Q8N3E9 789 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC85AQ96PX6 553 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 NEMFO60524 1076 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 GBP3Q9H0R5 595 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC61Q9Y6R9 512 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 STX1AQ16623 288 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 TCEANC2Q96MN5 208 aa4.87□□□□□ -1.63
BRCA2-201ENST00000380152 LUC7LQ9NQ29 371 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 IDH1O75874 414 aaKnown RBP4.87□□□□□ -1.63
BRCA2-201ENST00000380152 NEFHP12036 1026 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms