RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 SOS1Q07889 1333 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 PHKG2P15735 406 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 ZNF772Q68DY9 489 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-202ENST00000379996 NGLY1Q96IV0 654 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-202ENST00000379996 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-202ENST00000379996 RARSP54136 660 aaKnown RBP9.88□□□□□ -0.83
CDKL5-202ENST00000379996 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 IFNL2Q8IZJ0 200 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
CDKL5-202ENST00000379996 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
CDKL5-202ENST00000379996 STRN4Q9NRL3 753 aa9.87□□□□□ -0.83
CDKL5-202ENST00000379996 BRWD3Q6RI45 1802 aa9.87□□□□□ -0.83
CDKL5-202ENST00000379996 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
CDKL5-202ENST00000379996 MEX3CQ5U5Q3 659 aaKnown RBP9.86□□□□□ -0.83
CDKL5-202ENST00000379996 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-202ENST00000379996 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-202ENST00000379996 ARXQ96QS3 562 aa9.86□□□□□ -0.83
CDKL5-202ENST00000379996 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-202ENST00000379996 RREB1Q92766 1687 aa9.86□□□□□ -0.83
CDKL5-202ENST00000379996 PSEN1P49768 467 aa9.86□□□□□ -0.83
CDKL5-202ENST00000379996 MYH16Q9H6N6 1097 aa9.86□□□□□ -0.83
CDKL5-202ENST00000379996 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
CDKL5-202ENST00000379996 ERVV-2B6SEH9 535 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 CHL1O00533 1208 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 CYP27B1O15528 508 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 RNMTO43148 476 aaKnown RBP9.85□□□□□ -0.83
CDKL5-202ENST00000379996 RLBP1P12271 317 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 CACNA1FO60840 1977 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-202ENST00000379996 GNAI1P63096 354 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 E2F4Q16254 413 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 C1orf141Q5JVX7 400 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-202ENST00000379996 IFNL1Q8IU54 200 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 IL17REQ8NFR9 667 aa9.85□□□□□ -0.83
CDKL5-202ENST00000379996 N4BP2Q86UW6 1770 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-202ENST00000379996 KCPQ6ZWJ8 1503 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 AAMPQ13685 434 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 ZNF428Q96B54 188 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 LY75O60449 1722 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 RTF1Q92541 710 aaKnown RBP9.84□□□□□ -0.83
CDKL5-202ENST00000379996 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 TNNQ9UQP3 1299 aa9.84□□□□□ -0.83
CDKL5-202ENST00000379996 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
CDKL5-202ENST00000379996 TUBGCP6Q96RT7 1819 aa9.83□□□□□ -0.84
CDKL5-202ENST00000379996 C5P01031 1676 aa9.83□□□□□ -0.84
CDKL5-202ENST00000379996 EXOC5O00471 708 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 SLC52A2Q9HAB3 445 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 HOXB7P09629 217 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-202ENST00000379996 PANK1Q8TE04 598 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 COL5A3P25940 1745 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-202ENST00000379996 TJP1Q07157 1748 aa9.82□□□□□ -0.84
CDKL5-202ENST00000379996 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
CDKL5-202ENST00000379996 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
CDKL5-202ENST00000379996 DDB1Q16531 1140 aa9.81□□□□□ -0.84
CDKL5-202ENST00000379996 BTAF1O14981 1849 aa9.81□□□□□ -0.84
CDKL5-202ENST00000379996 TNS1Q9HBL0 1735 aaKnown RBP9.81□□□□□ -0.84
CDKL5-202ENST00000379996 MAP3K13O43283 966 aa9.81□□□□□ -0.84
CDKL5-202ENST00000379996 QTRT2Q9H974 415 aaKnown RBP9.81□□□□□ -0.84
CDKL5-202ENST00000379996 SEC24BO95487 1268 aa9.8□□□□□ -0.84
CDKL5-202ENST00000379996 MCM10Q7L590 875 aa9.8□□□□□ -0.84
CDKL5-202ENST00000379996 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
CDKL5-202ENST00000379996 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
CDKL5-202ENST00000379996 RGS17Q9UGC6 210 aaPredicted RBP9.8□□□□□ -0.84
CDKL5-202ENST00000379996 RGS12O14924 1447 aa9.8□□□□□ -0.84
CDKL5-202ENST00000379996 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
CDKL5-202ENST00000379996 LGR6Q9HBX8 967 aa9.79□□□□□ -0.84
CDKL5-202ENST00000379996 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
CDKL5-202ENST00000379996 MARCH10Q8NA82 808 aaPredicted RBP9.79□□□□□ -0.84
CDKL5-202ENST00000379996 CHMP4AQ9BY43 222 aa9.79□□□□□ -0.84
CDKL5-202ENST00000379996 ALDH1L2Q3SY69 923 aa9.78□□□□□ -0.84
CDKL5-202ENST00000379996 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
CDKL5-202ENST00000379996 MPRIPQ6WCQ1 1025 aa9.78□□□□□ -0.84
CDKL5-202ENST00000379996 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
CDKL5-202ENST00000379996 DCTN1Q14203 1278 aa9.78□□□□□ -0.84
CDKL5-202ENST00000379996 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
CDKL5-202ENST00000379996 MVPQ14764 893 aaKnown RBP9.77□□□□□ -0.85
CDKL5-202ENST00000379996 TAF1LQ8IZX4 1826 aa9.77□□□□□ -0.85
CDKL5-202ENST00000379996 EIF4A1P60842 406 aaKnown RBP9.77□□□□□ -0.85
CDKL5-202ENST00000379996 TEFQ10587 303 aa9.77□□□□□ -0.85
CDKL5-202ENST00000379996 ZNF467Q7Z7K2 595 aaPredicted RBP9.76□□□□□ -0.85
CDKL5-202ENST00000379996 THUMPD2Q9BTF0 503 aaKnown RBP9.76□□□□□ -0.85
CDKL5-202ENST00000379996 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
CDKL5-202ENST00000379996 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
CDKL5-202ENST00000379996 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
CDKL5-202ENST00000379996 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms