RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LCMT1Q9UIC8 334 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 GTF3C5Q9Y5Q8 519 aaPredicted RBP9□□□□□ -0.97
CDKL5-201ENST00000379989 FMN2Q9NZ56 1722 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 CYP2E1P05181 493 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 RBM6P78332 1123 aaKnown RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 DNAJC21Q5F1R6 531 aaKnown RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 PYCARDQ9ULZ3 195 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 NOL10Q9BSC4 688 aaKnown RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 MINK1Q8N4C8 1332 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 PTPRUQ92729 1446 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 DIAPH1O60610 1272 aaKnown RBP8.99□□□□□ -0.97
CDKL5-201ENST00000379989 KIF1BPQ96EK5 621 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 SH3BP1Q9Y3L3 701 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
CDKL5-201ENST00000379989 TSPY26PQ9H489 355 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 JRKLQ9Y4A0 524 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 GOLIM4O00461 696 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 SEMA3FQ13275 785 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 PKP1Q13835 747 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 DRC1Q96MC2 740 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 USP25Q9UHP3 1055 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 SSH2Q76I76 1423 aa8.98□□□□□ -0.97
CDKL5-201ENST00000379989 TTC21BQ7Z4L5 1316 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 SART3Q15020 963 aaKnown RBP8.97□□□□□ -0.97
CDKL5-201ENST00000379989 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 ZNF397Q8NF99 534 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-201ENST00000379989 NUDT16Q96DE0 195 aaKnown RBP8.97□□□□□ -0.97
CDKL5-201ENST00000379989 SGSM3Q96HU1 749 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 KCNF1Q9H3M0 494 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 APAF1O14727 1248 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
CDKL5-201ENST00000379989 MAP2P11137 1827 aaKnown RBP8.97□□□□□ -0.97
CDKL5-201ENST00000379989 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 ADCY5O95622 1261 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 NEK11Q8NG66 645 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 USP6P35125 1406 aa8.97□□□□□ -0.97
CDKL5-201ENST00000379989 CCDC189A1A4V9 331 aa8.96□□□□□ -0.97
CDKL5-201ENST00000379989 SMTNL1A8MU46 457 aa8.96□□□□□ -0.97
CDKL5-201ENST00000379989 GOLGA6L6A8MZA4 724 aa8.96□□□□□ -0.97
CDKL5-201ENST00000379989 MAP2K1Q02750 393 aaPredicted RBP8.96□□□□□ -0.97
CDKL5-201ENST00000379989 PLCD4Q9BRC7 762 aa8.96□□□□□ -0.97
CDKL5-201ENST00000379989 CABP1Q9NZU7 370 aa8.96□□□□□ -0.97
CDKL5-201ENST00000379989 PHRF1Q9P1Y6 1649 aaKnown RBP8.96□□□□□ -0.97
CDKL5-201ENST00000379989 TNNT1P13805 278 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 NUCB2P80303 420 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 COG3Q96JB2 828 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 SUFUQ9UMX1 484 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 TCP11L2Q8N4U5 519 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 CHAMP1Q96JM3 812 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 PLEKHF1Q96S99 279 aa8.96□□□□□ -0.98
CDKL5-201ENST00000379989 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-201ENST00000379989 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
CDKL5-201ENST00000379989 KIF1CO43896 1103 aaKnown RBP8.95□□□□□ -0.98
CDKL5-201ENST00000379989 ATP2B1P20020 1258 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 KRBA2Q6ZNG9 492 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 RWDD1Q9H446 243 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-201ENST00000379989 RAI14Q9P0K7 980 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 RTL1A6NKG5 1358 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 MST1RQ04912 1400 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 ALDH1L2Q3SY69 923 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 FBXO38Q6PIJ6 1188 aa8.95□□□□□ -0.98
CDKL5-201ENST00000379989 RGPD1P0DJD0 1748 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 TDO2P48775 406 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 GSCP56915 257 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-201ENST00000379989 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 MED4Q9NPJ6 270 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 PACS2Q86VP3 889 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
CDKL5-201ENST00000379989 LMTK3Q96Q04 1460 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 U2AF1L5P0DN76 240 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-201ENST00000379989 U2AF1Q01081 240 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDKL5-201ENST00000379989 ANKLE2Q86XL3 938 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 RLBP1P12271 317 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 BMS1Q14692 1282 aaKnown RBP8.93□□□□□ -0.98
CDKL5-201ENST00000379989 SRLQ86TD4 932 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 TXLNBQ8N3L3 684 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 CCDC191Q8NCU4 936 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 TNNQ9UQP3 1299 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 ARHGEF10O15013 1369 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 A0A1B0GUL7 405 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 NUTM2DQ5VT03 806 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-201ENST00000379989 GTF3C6Q969F1 213 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 ZDHHC9Q9Y397 364 aa8.93□□□□□ -0.98
CDKL5-201ENST00000379989 ABCC6O95255 1503 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 MBD3O95983 291 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 TMPOP42166 694 aaKnown RBP8.92□□□□□ -0.98
CDKL5-201ENST00000379989 IPO8O15397 1037 aaKnown RBP8.92□□□□□ -0.98
CDKL5-201ENST00000379989 E2F4Q16254 413 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 FAM184AQ8NB25 1140 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms