RNA–Protein interactions for RNA: ENST00000379721.3

SPINK4-201, Transcript of serine peptidase inhibitor, Kazal type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPINK4, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4-201ENST00000379721 COL15A1P39059 1388 aa16.46■□□□□ 0.23
SPINK4-201ENST00000379721 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
SPINK4-201ENST00000379721 CHD4Q14839 1912 aa16.45■□□□□ 0.22
SPINK4-201ENST00000379721 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
SPINK4-201ENST00000379721 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SPINK4-201ENST00000379721 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
SPINK4-201ENST00000379721 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
SPINK4-201ENST00000379721 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPINK4-201ENST00000379721 TAF7Q15545 349 aaPredicted RBP16.44■□□□□ 0.22
SPINK4-201ENST00000379721 GPR162Q16538 588 aa16.44■□□□□ 0.22
SPINK4-201ENST00000379721 UTRNP46939 3433 aa16.44■□□□□ 0.22
SPINK4-201ENST00000379721 ZPR1O75312 459 aa16.43■□□□□ 0.22
SPINK4-201ENST00000379721 FKBP8Q14318 412 aa16.43■□□□□ 0.22
SPINK4-201ENST00000379721 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
SPINK4-201ENST00000379721 USPL1Q5W0Q7 1092 aa16.42■□□□□ 0.22
SPINK4-201ENST00000379721 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
SPINK4-201ENST00000379721 NARFQ9UHQ1 456 aa16.42■□□□□ 0.22
SPINK4-201ENST00000379721 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
SPINK4-201ENST00000379721 YY1P25490 414 aa16.41■□□□□ 0.22
SPINK4-201ENST00000379721 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
SPINK4-201ENST00000379721 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
SPINK4-201ENST00000379721 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
SPINK4-201ENST00000379721 C10orf71Q711Q0 1435 aa16.41■□□□□ 0.22
SPINK4-201ENST00000379721 LAMB4A4D0S4 1761 aa16.41■□□□□ 0.22
SPINK4-201ENST00000379721 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SPINK4-201ENST00000379721 KIAA1551Q9HCM1 1747 aa16.4■□□□□ 0.22
SPINK4-201ENST00000379721 A1BGP04217 495 aa16.4■□□□□ 0.22
SPINK4-201ENST00000379721 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
SPINK4-201ENST00000379721 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
SPINK4-201ENST00000379721 RIPK4P57078 832 aa16.4■□□□□ 0.22
SPINK4-201ENST00000379721 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
SPINK4-201ENST00000379721 A0A087WZG4 1122 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
SPINK4-201ENST00000379721 DDR1Q08345 913 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SPINK4-201ENST00000379721 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
SPINK4-201ENST00000379721 PXDNLA1KZ92 1463 aa16.38■□□□□ 0.21
SPINK4-201ENST00000379721 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPINK4-201ENST00000379721 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
SPINK4-201ENST00000379721 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
SPINK4-201ENST00000379721 TM4SF1P30408 202 aa16.37■□□□□ 0.21
SPINK4-201ENST00000379721 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
SPINK4-201ENST00000379721 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
SPINK4-201ENST00000379721 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
SPINK4-201ENST00000379721 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
SPINK4-201ENST00000379721 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
SPINK4-201ENST00000379721 NFIXQ14938 502 aa16.36■□□□□ 0.21
SPINK4-201ENST00000379721 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
SPINK4-201ENST00000379721 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
SPINK4-201ENST00000379721 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
SPINK4-201ENST00000379721 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
SPINK4-201ENST00000379721 TGFB2P61812 414 aa16.35■□□□□ 0.21
SPINK4-201ENST00000379721 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
SPINK4-201ENST00000379721 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
SPINK4-201ENST00000379721 BRCA1P38398 1863 aaKnown RBP16.35■□□□□ 0.21
SPINK4-201ENST00000379721 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
SPINK4-201ENST00000379721 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
SPINK4-201ENST00000379721 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
SPINK4-201ENST00000379721 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
SPINK4-201ENST00000379721 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
SPINK4-201ENST00000379721 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 ANP32CO43423 234 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 DPEP1P16444 411 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
SPINK4-201ENST00000379721 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
SPINK4-201ENST00000379721 SERPINB2P05120 415 aa16.31■□□□□ 0.2
SPINK4-201ENST00000379721 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
SPINK4-201ENST00000379721 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
SPINK4-201ENST00000379721 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
SPINK4-201ENST00000379721 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
SPINK4-201ENST00000379721 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
SPINK4-201ENST00000379721 APAF1O14727 1248 aa16.28■□□□□ 0.2
SPINK4-201ENST00000379721 KCNA3P22001 575 aa16.28■□□□□ 0.2
SPINK4-201ENST00000379721 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
SPINK4-201ENST00000379721 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
SPINK4-201ENST00000379721 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 CHL1O00533 1208 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 CHRNA5P30532 468 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 ZNF652Q9Y2D9 606 aa16.27■□□□□ 0.2
SPINK4-201ENST00000379721 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
SPINK4-201ENST00000379721 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
SPINK4-201ENST00000379721 RGL2O15211 777 aa16.26■□□□□ 0.19
SPINK4-201ENST00000379721 ZNF784Q8NCA9 323 aaPredicted RBP16.26■□□□□ 0.19
SPINK4-201ENST00000379721 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
SPINK4-201ENST00000379721 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
SPINK4-201ENST00000379721 NUP98P52948 1817 aa16.25■□□□□ 0.19
SPINK4-201ENST00000379721 MYL6BP14649 208 aa16.25■□□□□ 0.19
SPINK4-201ENST00000379721 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
SPINK4-201ENST00000379721 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
SPINK4-201ENST00000379721 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
SPINK4-201ENST00000379721 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms