RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 HCLS1P14317 486 aaPredicted RBP11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 SOX12O15370 315 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 ADCY5O95622 1261 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
NHLRC3-202ENST00000379600 AOX1Q06278 1338 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 RAD50Q92878 1312 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 LARGE1O95461 756 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 NOLC1Q14978 699 aaKnown RBP eCLIP11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 GNAI3P08754 354 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 AK2P54819 239 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 SGSM2O43147 1006 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 PHF14O94880 888 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 SYT1P21579 422 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
NHLRC3-202ENST00000379600 SOS1Q07889 1333 aaPredicted RBP11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 CPA1P15085 419 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 NWD1Q149M9 1564 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 PLEKHG3A1L390 1219 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 EYA1Q99502 592 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 KCNF1Q9H3M0 494 aa11.29□□□□□ -0.6
NHLRC3-202ENST00000379600 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 POLA2Q14181 598 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 MTERF4Q7Z6M4 381 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 STK31Q9BXU1 1019 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 MARF1Q9Y4F3 1742 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 STX6O43752 255 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 KDM4AO75164 1064 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 ADAMTS13Q76LX8 1427 aa11.28□□□□□ -0.6
NHLRC3-202ENST00000379600 PIK3C2AO00443 1686 aa11.27□□□□□ -0.6
NHLRC3-202ENST00000379600 F13A1P00488 732 aa11.27□□□□□ -0.6
NHLRC3-202ENST00000379600 UBE2HP62256 183 aa11.27□□□□□ -0.6
NHLRC3-202ENST00000379600 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.6
NHLRC3-202ENST00000379600 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.6
NHLRC3-202ENST00000379600 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 HMGN5P82970 282 aaKnown RBP11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 CCDC30Q5VVM6 783 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 PRIMPOLQ96LW4 560 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 SBNO1A3KN83 1393 aa11.27□□□□□ -0.61
NHLRC3-202ENST00000379600 FIBPO43427 364 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 RHPN1Q8TCX5 695 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 FLT4P35916 1363 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
NHLRC3-202ENST00000379600 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 UBTFL1P0CB47 393 aaPredicted RBP11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 MLECQ14165 292 aa11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 PTH1RQ03431 593 aa11.25□□□□□ -0.61
NHLRC3-202ENST00000379600 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 PTPRUQ92729 1446 aa11.24□□□□□ -0.61
NHLRC3-202ENST00000379600 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 GJB2P29033 226 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 HTATSF1O43719 755 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
NHLRC3-202ENST00000379600 SMC3Q9UQE7 1217 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms