RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 EZH2Q15910 746 aaKnown RBP31.52■■■□□ 2.64
TM6SF1-204ENST00000379390 SLC27A3Q5K4L6 730 aa31.51■■■□□ 2.63
TM6SF1-204ENST00000379390 HDGFL1Q5TGJ6 251 aa31.51■■■□□ 2.63
TM6SF1-204ENST00000379390 LINC00116Q8NCU8 138 aa31.51■■■□□ 2.63
TM6SF1-204ENST00000379390 CAMKK2Q96RR4 588 aa31.51■■■□□ 2.63
TM6SF1-204ENST00000379390 SOS1Q07889 1333 aaPredicted RBP31.5■■■□□ 2.63
TM6SF1-204ENST00000379390 TEX13AQ9BXU3 409 aaPredicted RBP31.49■■■□□ 2.63
TM6SF1-204ENST00000379390 TCERG1O14776 1098 aaKnown RBP31.49■■■□□ 2.63
TM6SF1-204ENST00000379390 CYP19A1P11511 503 aaPredicted RBP31.49■■■□□ 2.63
TM6SF1-204ENST00000379390 STARD3NLO95772 234 aa31.47■■■□□ 2.63
TM6SF1-204ENST00000379390 CT47B1P0C2W7 299 aaPredicted RBP31.46■■■□□ 2.63
TM6SF1-204ENST00000379390 PIP4K2AP48426 406 aaPredicted RBP31.46■■■□□ 2.63
TM6SF1-204ENST00000379390 TUBGCP6Q96RT7 1819 aa31.45■■■□□ 2.62
TM6SF1-204ENST00000379390 A1BGP04217 495 aa31.45■■■□□ 2.62
TM6SF1-204ENST00000379390 CRKLP46109 303 aaKnown RBP31.45■■■□□ 2.62
TM6SF1-204ENST00000379390 UBR3Q6ZT12 1888 aa31.44■■■□□ 2.62
TM6SF1-204ENST00000379390 CHPF2Q9P2E5 772 aa31.44■■■□□ 2.62
TM6SF1-204ENST00000379390 CCDC30Q5VVM6 783 aa31.43■■■□□ 2.62
TM6SF1-204ENST00000379390 BCL2L13Q9BXK5 485 aa31.43■■■□□ 2.62
TM6SF1-204ENST00000379390 ANXA1P04083 346 aa31.42■■■□□ 2.62
TM6SF1-204ENST00000379390 CCDC87Q9NVE4 849 aa31.42■■■□□ 2.62
TM6SF1-204ENST00000379390 ZBTB1Q9Y2K1 713 aa31.42■■■□□ 2.62
TM6SF1-204ENST00000379390 PROSER3Q2NL68 480 aa31.41■■■□□ 2.62
TM6SF1-204ENST00000379390 INTS5Q6P9B9 1019 aaKnown RBP31.41■■■□□ 2.62
TM6SF1-204ENST00000379390 CNTNAP4Q9C0A0 1308 aa31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 NBPF26B4DH59 902 aa31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 RARSP54136 660 aaKnown RBP31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 NBPF14Q5TI25 921 aa31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 NBPF10Q6P3W6 841 aaKnown RBP31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 NBPF15Q8N660 670 aa31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 SSH1Q8WYL5 1049 aa31.4■■■□□ 2.62
TM6SF1-204ENST00000379390 MYL6BP14649 208 aa31.39■■■□□ 2.62
TM6SF1-204ENST00000379390 CANXP27824 592 aaKnown RBP31.39■■■□□ 2.62
TM6SF1-204ENST00000379390 ZNF428Q96B54 188 aa31.39■■■□□ 2.62
TM6SF1-204ENST00000379390 STK31Q9BXU1 1019 aa31.39■■■□□ 2.62
TM6SF1-204ENST00000379390 PDIA6Q15084 440 aa31.38■■■□□ 2.61
TM6SF1-204ENST00000379390 DBF4Q9UBU7 674 aaPredicted RBP31.38■■■□□ 2.61
TM6SF1-204ENST00000379390 CHMP4AQ9BY43 222 aa31.38■■■□□ 2.61
TM6SF1-204ENST00000379390 SMC4Q9NTJ3 1288 aa31.38■■■□□ 2.61
TM6SF1-204ENST00000379390 RCAN3Q9UKA8 241 aa31.38■■■□□ 2.61
TM6SF1-204ENST00000379390 ERBB4Q15303 1308 aa31.37■■■□□ 2.61
TM6SF1-204ENST00000379390 AK7Q96M32 723 aa31.36■■■□□ 2.61
TM6SF1-204ENST00000379390 DDX21Q9NR30 783 aaKnown RBP eCLIP31.36■■■□□ 2.61
TM6SF1-204ENST00000379390 ZNF330Q9Y3S2 320 aaPredicted RBP31.36■■■□□ 2.61
TM6SF1-204ENST00000379390 C4AP0C0L4 1744 aa31.36■■■□□ 2.61
TM6SF1-204ENST00000379390 GNPATO15228 680 aa31.35■■■□□ 2.61
TM6SF1-204ENST00000379390 SLC4A2P04920 1241 aa31.35■■■□□ 2.61
TM6SF1-204ENST00000379390 ALDH1L2Q3SY69 923 aa31.35■■■□□ 2.61
TM6SF1-204ENST00000379390 RC3H1Q5TC82 1133 aaKnown RBP31.35■■■□□ 2.61
TM6SF1-204ENST00000379390 BCAR3O75815 825 aa31.34■■■□□ 2.61
TM6SF1-204ENST00000379390 ZNF827Q17R98 1081 aa31.34■■■□□ 2.61
TM6SF1-204ENST00000379390 SMIM5Q71RC9 77 aa31.33■■■□□ 2.61
TM6SF1-204ENST00000379390 ANO8Q9HCE9 1232 aaPredicted RBP31.33■■■□□ 2.61
TM6SF1-204ENST00000379390 LRP10Q7Z4F1 713 aa31.32■■■□□ 2.6
TM6SF1-204ENST00000379390 AMIGO3Q86WK7 504 aa31.32■■■□□ 2.6
TM6SF1-204ENST00000379390 MRPL50Q8N5N7 158 aaKnown RBP31.32■■■□□ 2.6
TM6SF1-204ENST00000379390 PHAXQ9H814 394 aaKnown RBP31.31■■■□□ 2.6
TM6SF1-204ENST00000379390 G2E3Q7L622 706 aa31.31■■■□□ 2.6
TM6SF1-204ENST00000379390 AKT1S1Q96B36 256 aa31.31■■■□□ 2.6
TM6SF1-204ENST00000379390 HYPKQ9NX55 129 aa31.31■■■□□ 2.6
TM6SF1-204ENST00000379390 QSER1Q2KHR3 1735 aa31.3■■■□□ 2.6
TM6SF1-204ENST00000379390 CENPBP07199 599 aaPredicted RBP31.3■■■□□ 2.6
TM6SF1-204ENST00000379390 HMGB2P26583 209 aaKnown RBP31.3■■■□□ 2.6
TM6SF1-204ENST00000379390 IL6STP40189 918 aaPredicted RBP31.3■■■□□ 2.6
TM6SF1-204ENST00000379390 COL15A1P39059 1388 aa31.29■■■□□ 2.6
TM6SF1-204ENST00000379390 RPS6KA4O75676 772 aa31.29■■■□□ 2.6
TM6SF1-204ENST00000379390 RTCBQ9Y3I0 505 aaKnown RBP31.29■■■□□ 2.6
TM6SF1-204ENST00000379390 PHF14O94880 888 aa31.28■■■□□ 2.6
TM6SF1-204ENST00000379390 ARFGEF2Q9Y6D5 1785 aa31.28■■■□□ 2.6
TM6SF1-204ENST00000379390 EIF5P55010 431 aaKnown RBP31.27■■■□□ 2.6
TM6SF1-204ENST00000379390 AIMP1Q12904 312 aaKnown RBP31.27■■■□□ 2.6
TM6SF1-204ENST00000379390 BCORQ6W2J9 1755 aa31.27■■■□□ 2.6
TM6SF1-204ENST00000379390 XAGE3Q8WTP9 111 aa31.27■■■□□ 2.6
TM6SF1-204ENST00000379390 TFCP2L1Q9NZI6 479 aa31.27■■■□□ 2.6
TM6SF1-204ENST00000379390 FLIIQ13045 1269 aa31.26■■■□□ 2.59
TM6SF1-204ENST00000379390 COPS6Q7L5N1 327 aa31.25■■■□□ 2.59
TM6SF1-204ENST00000379390 ARXQ96QS3 562 aa31.25■■■□□ 2.59
TM6SF1-204ENST00000379390 STK32BQ9NY57 414 aa31.25■■■□□ 2.59
TM6SF1-204ENST00000379390 SCN7AQ01118 1682 aa31.25■■■□□ 2.59
TM6SF1-204ENST00000379390 NUP98P52948 1817 aa31.24■■■□□ 2.59
TM6SF1-204ENST00000379390 NPM2Q86SE8 214 aaKnown RBP31.24■■■□□ 2.59
TM6SF1-204ENST00000379390 TTLL7Q6ZT98 887 aa31.24■■■□□ 2.59
TM6SF1-204ENST00000379390 KIF16BQ96L93 1317 aa31.23■■■□□ 2.59
TM6SF1-204ENST00000379390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.23■■■□□ 2.59
TM6SF1-204ENST00000379390 BRPF1P55201 1214 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-204ENST00000379390 SLC15A2Q16348 729 aa31.23■■■□□ 2.59
TM6SF1-204ENST00000379390 FRAT1Q92837 279 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-204ENST00000379390 NOB1Q9ULX3 412 aaKnown RBP31.22■■■□□ 2.59
TM6SF1-204ENST00000379390 FKBP5Q13451 457 aaPredicted RBP31.21■■■□□ 2.59
TM6SF1-204ENST00000379390 TBC1D2BQ9UPU7 963 aa31.21■■■□□ 2.59
TM6SF1-204ENST00000379390 SSFA2P28290 1259 aa31.2■■■□□ 2.59
TM6SF1-204ENST00000379390 DZIP3Q86Y13 1208 aaKnown RBP31.2■■■□□ 2.59
TM6SF1-204ENST00000379390 ARHGEF1Q92888 912 aaKnown RBP31.2■■■□□ 2.58
TM6SF1-204ENST00000379390 ANKRD36CQ5JPF3 1778 aa31.19■■■□□ 2.58
TM6SF1-204ENST00000379390 TRAPPC3LQ5T215 181 aa31.19■■■□□ 2.58
TM6SF1-204ENST00000379390 PNPLA7Q6ZV29 1317 aa31.18■■■□□ 2.58
TM6SF1-204ENST00000379390 KIF6Q6ZMV9 814 aa31.18■■■□□ 2.58
TM6SF1-204ENST00000379390 ZBTB3Q9H5J0 574 aa31.18■■■□□ 2.58
TM6SF1-204ENST00000379390 ADRA2BP18089 450 aa31.17■■■□□ 2.58
TM6SF1-204ENST00000379390 ADCY9O60503 1353 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 875.7 ms